Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00190 ATGGGCAGTAGGAATCGACCTTGGCACGACCTACTCATGTGTTGCTGTGTGCAAGGCAACAGAATCACACCTTCTTGTGTTGCTTTCACAGACAATCAGAGATTGATTGGTGATGCTGCTAAGAATCAGGCTGCCACCAACCCAACCAACACTGTCTTTGATGTGAAGAGGTTAATTGACAGAAGATATAGTGATCCCGCTATTCAGAATGATCTAATGTTATGGCCATTTAAGGTCATCTCTGGTATTGATGACAAACCCATGATTGTTGTTAAGTACAAGGGTCAAGAGAAGCATATTTCTGCAGAGGAAATTTCGTCTATGGTACTCACAAAGATGCGTAAGATAGCGGAGGAATATTTGGAGTCACCAGTAAAGAATGCTGTTGTTACTGTGCCTGCTTATTTCAATGACTCTCAGCGCCAAGCTACCAAAGATGCTGGTGCCATTGCTGGTCTCAATGTTATGCGGATAATCAATGAGCCTTGA 489 0.4315 MGSRNRPWHDLLMCCCVQGNRITPSCVAFTDNQRLIGDAAKNQAATNPTNTVFDVKRLIDRRYSDPAIQNDLMLWPFKVISGIDDKPMIVVKYKGQEKHISAEEISSMVLTKMRKIAEEYLESPVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEP. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00190 162 Gene3D - 53 104 - -
Seca2g00190 162 SUPERFAMILY Actin-like ATPase domain 15 162 IPR043129 -
Seca2g00190 162 Gene3D - 13 162 - -
Seca2g00190 162 PANTHER HEAT SHOCK PROTEIN 70KDA 18 162 IPR013126 GO:0005524|GO:0140662
Seca2g00190 162 PRINTS 70kDa heat shock protein signature 40 48 - -
Seca2g00190 162 PRINTS 70kDa heat shock protein signature 128 148 - -
Seca2g00190 162 PRINTS 70kDa heat shock protein signature 18 30 - -
Seca2g00190 162 FunFam heat shock 70 kDa protein-like 53 108 - -
Seca2g00190 162 Pfam Hsp70 protein 18 162 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00190 Seca-Chr2 2804584 2805391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00190 18 162 Calmodulin-binding Proteins AT3G12580 79.310 5.49e-77 239