Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00189 ATGGCCAAAAAAAATGAGGGACATGCTATAGGAATTGACCTTGGAACTACCTACTCATGTGTTGCAGTATGGCAGGAACAAAACAACCGAGCAGAGATCATCCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTCACTGACACAAAAAGGTTGGTAGGAGATGCTGCCAAAAATCAGGCTGCCTCCAATCCATCCAACACTGTCTTTGGTAATTGA 228 0.4298 MAKKNEGHAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFTDTKRLVGDAAKNQAASNPSNTVFGN. 76
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00189 75 SUPERFAMILY Actin-like ATPase domain 8 74 IPR043129 -
Seca2g00189 75 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca2g00189 75 Gene3D - 1 75 - -
Seca2g00189 75 Pfam Hsp70 protein 9 73 IPR013126 GO:0005524|GO:0140662
Seca2g00189 75 PRINTS 70kDa heat shock protein signature 38 50 - -
Seca2g00189 75 PRINTS 70kDa heat shock protein signature 60 68 - -
Seca2g00189 75 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca2g00189 75 FunFam heat shock 70 kDa protein-like 3 75 - -
Seca2g00189 75 PANTHER HEAT SHOCK PROTEIN 70KDA 9 73 IPR013126 GO:0005524|GO:0140662
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca2g00189 Seca-Chr2 2789780 2790007 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00189 1 73 Calmodulin-binding Proteins AT3G12580 75.342 2.72e-33 117
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00189 K03283 - lja:Lj0g3v0174969.1 139.813