Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g00189 | ATGGCCAAAAAAAATGAGGGACATGCTATAGGAATTGACCTTGGAACTACCTACTCATGTGTTGCAGTATGGCAGGAACAAAACAACCGAGCAGAGATCATCCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTCACTGACACAAAAAGGTTGGTAGGAGATGCTGCCAAAAATCAGGCTGCCTCCAATCCATCCAACACTGTCTTTGGTAATTGA | 228 | 0.4298 | MAKKNEGHAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFTDTKRLVGDAAKNQAASNPSNTVFGN. | 76 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g00189 | 75 | SUPERFAMILY | Actin-like ATPase domain | 8 | 74 | IPR043129 | - | |
Seca2g00189 | 75 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Seca2g00189 | 75 | Gene3D | - | 1 | 75 | - | - | |
Seca2g00189 | 75 | Pfam | Hsp70 protein | 9 | 73 | IPR013126 | GO:0005524|GO:0140662 | |
Seca2g00189 | 75 | PRINTS | 70kDa heat shock protein signature | 38 | 50 | - | - | |
Seca2g00189 | 75 | PRINTS | 70kDa heat shock protein signature | 60 | 68 | - | - | |
Seca2g00189 | 75 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Seca2g00189 | 75 | FunFam | heat shock 70 kDa protein-like | 3 | 75 | - | - | |
Seca2g00189 | 75 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 9 | 73 | IPR013126 | GO:0005524|GO:0140662 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g00189 | Seca-Chr2 | 2789780 | 2790007 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca2g00189 | 1 | 73 | Calmodulin-binding Proteins | AT3G12580 | 75.342 | 2.72e-33 | 117 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g00189 | K03283 | - | lja:Lj0g3v0174969.1 | 139.813 |