Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00184 ATGGAGATTATCCATAACAACCAAGGCAACAAAATCACACCTTCATGTGTTGCTTTCACAGACACTCAAAGATTGATTGGAGATGCTGCCAAAAATCAAGCATCCACCAACCCAGCCAACACTGTCTTTGGGAATAAGAATGAGATTACAATAACAAATGAAAATGGGAGACTGTCAGCTGAGGAAATTGAGAGAATGATTGAGGAAGCTGTGAATTACAAGGCTGAAGATATGAATTACAAGAAGAAGGTTAAGGTAATTAATACTTTGGATAGTTACATTTATAATATGGATGAAGTTATGATGGATAAGGGTAGTTCTAAGCTTTCCCCACAAGACAAAAACAAGATCAATTCTGCAATTATGAGAGGCAGAGATTTGCTTGATAACAACCAGCAAGAGGAAGTGTATGTGTTTGAGAACTTTTTGAAGGAGCTTCAGAGCATCTATAAGTCCTCTATGGAAAAGATCAACAATAGTTGCGCTTACGAGGAAAGTGATGATGATTATTGA 513 0.3704 MEIIHNNQGNKITPSCVAFTDTQRLIGDAAKNQASTNPANTVFGNKNEITITNENGRLSAEEIERMIEEAVNYKAEDMNYKKKVKVINTLDSYIYNMDEVMMDKGSSKLSPQDKNKINSAIMRGRDLLDNNQQEEVYVFENFLKELQSIYKSSMEKINNSCAYEESDDDY. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00184 170 PANTHER HEAT SHOCK PROTEIN 70KDA 2 46 IPR013126 GO:0005524|GO:0140662
Seca2g00184 170 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 87 160 IPR029048 -
Seca2g00184 170 Gene3D - 1 73 - -
Seca2g00184 170 SUPERFAMILY Actin-like ATPase domain 2 90 IPR043129 -
Seca2g00184 170 Pfam Hsp70 protein 2 47 IPR013126 GO:0005524|GO:0140662
Seca2g00184 170 PRINTS 70kDa heat shock protein signature 30 38 - -
Seca2g00184 170 PRINTS 70kDa heat shock protein signature 8 20 - -
Seca2g00184 170 Gene3D - 74 167 IPR029048 -
Seca2g00184 170 FunFam heat shock 70 kDa protein-like 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00184 Seca-Chr2 2667427 2674290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00184 1 49 Calmodulin-binding Proteins AT3G12580 67.347 2.35e-15 70.9