Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00183 ATGGCAAGACAAAATGATGGATGTGCGGTAGGAATAGACCTTGGCACGACCTACTCATGTGTTGCAGTATGGCAAGAGCAACACTGTCGAGTGGAGATCATCCACAATGACCAAGGCAACAGAACCACACCTTCATGTGTTGCTTTCACAGACAACCGAAGATTGATTAGTGATGCTGCTAAGAATCAGGCTGCCACCAACCCTGAGAACACTGTCTTTGGTAAACTTTCTAAGCTCTTCTTTATTTTTTGA 252 0.4444 MARQNDGCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSCVAFTDNRRLISDAAKNQAATNPENTVFGKLSKLFFIF. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00183 83 SUPERFAMILY Actin-like ATPase domain 9 74 IPR043129 -
Seca2g00183 83 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca2g00183 83 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca2g00183 83 PRINTS 70kDa heat shock protein signature 60 68 - -
Seca2g00183 83 PRINTS 70kDa heat shock protein signature 38 50 - -
Seca2g00183 83 Gene3D - 1 80 - -
Seca2g00183 83 PANTHER HEAT SHOCK PROTEIN 70KDA 9 74 IPR013126 GO:0005524|GO:0140662
Seca2g00183 83 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Seca2g00183 83 FunFam heat shock 70 kDa protein-like 3 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00183 Seca-Chr2 2652077 2652328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00183 1 73 Calmodulin-binding Proteins AT3G12580 75.342 2.12e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00183 K03283 - gmx:102667572 139.428