Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00181 ATGGCCAAAAAAAATGAACTTTGTGCCATAGGAATCGACCTGGGCACAACGTACTCATGTGTTGGAGTATGGTCGGAACAACATAGTAGAGTGGAAATTATCCACAATGATCAAGGCAACAAAACCACACCTTCTTTTGTTGCATTCACTGACAAACAAAGATTGATTGGAGGTGCTGCTGAAAATCAGGCTGCCATTAACCCGGAGAATACAGTCTTCGATGCTAAGAGGCTAATTGGTAGGAAATTTAGCGATGCTGTCATTCAGAAAGATATACTGTTGTGGCCATTCAAGGTAATTGCTGGTGTTAATGACAAACCCATAATTGTTGTTAAGTACAAGGGTCAAGTGAAACGCCTTTCAGCAGAGGAAATCTCATCCATGGTCCTTGCAAAGATGCGGGAGATTGCAGAGACATATTTGCAATCACCAGTGAAGAATGCTGTTATTACTGTGCCTGCTTATTTCAATGATTATCAGCGAAAAGCCACCAAAGATGCAGGTGTCATTGCTGGCCTCAATGTTATGCGGATAATCAATGAGCCCACTGCTGCAGCCATTGCATATGGCCTTGACAAAAGAACTAATTGTGTTGGAGAGCGAAATATAATATTTTTGTATTTGACCTTGGTGGTGGCACTTTTGATGTGTCTCTTCTTACAATTAAGGATAAGGTCTTCCAAGTTAAGGCTACTCTTGGAAACACTCACCTTGGGGGAGGGGATTTCGACAATAGAATGGTGA 744 0.418 MAKKNELCAIGIDLGTTYSCVGVWSEQHSRVEIIHNDQGNKTTPSFVAFTDKQRLIGGAAENQAAINPENTVFDAKRLIGRKFSDAVIQKDILLWPFKVIAGVNDKPIIVVKYKGQVKRLSAEEISSMVLAKMREIAETYLQSPVKNAVITVPAYFNDYQRKATKDAGVIAGLNVMRIINEPTAAAIAYGLDKRTNCVGERNIIFLYLTLVVALLMCLFLQLRIRSSKLRLLLETLTLGEGISTIEW. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00181 247 FunFam Heat shock protein 70 10 200 - -
Seca2g00181 247 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca2g00181 247 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Seca2g00181 247 PANTHER HEAT SHOCK PROTEIN 70KDA 9 203 IPR013126 GO:0005524|GO:0140662
Seca2g00181 247 PRINTS 70kDa heat shock protein signature 60 68 - -
Seca2g00181 247 PRINTS 70kDa heat shock protein signature 38 50 - -
Seca2g00181 247 PRINTS 70kDa heat shock protein signature 148 168 - -
Seca2g00181 247 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca2g00181 247 Gene3D - 2 217 - -
Seca2g00181 247 FunFam heat shock 70 kDa protein-like 73 128 - -
Seca2g00181 247 Pfam Hsp70 protein 9 206 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00181 Seca-Chr2 2633055 2633889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00181 1 215 Calmodulin-binding Proteins AT5G02500 71.560 1.56e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00181 K03283 - gmx:102667572 337.035