Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00170 ATGTCAACTACACAACGTAGTGAGAGTATTCATTCTTTCTTTGATGGATATGTCCACCACTCAACCACCTTGGAGCAATTTGTTAACCAATGTGACAATGCACTTCGAGATAGGGCAGAAAAGGAGTTCCAAGCTGATTTTCAATCTTTAAATAGAACAATGTCTTCTAATACAAAGTCTCCAATTGAAAGACAATTTCAAGCAAATTATACTCATAAAAAAATGAAAGAAGTCCAAGCCGAGTTCAGGGCTACAACTGATTGTCATGCATCATTAACACTACAACAAGGTTGTACCTGCACTTACAACGTAGTGGAAAACATTATTTTTGGGGATAGACCTAAAGAAGTAGAGTTTATTGTGGTGTTTAATAGAGAAAACCATGATATCAAGTTAGAACATGAAATTATAAGAGATATGAAAGAAAAGTTGTCTTACATTGCCCTTGACTATGAGCAAGAGCTGATGACAGCCAAGACAAACAATAGTGTGAAGAGATATAAGTTGCCTGACGGGAGGGTAATCAGTATTGGTGATGAGTGTTTCAAACGTGCAGAGGTGTTGTTCCAACCATCCTTCATACAAAGTAAAGAACTTGGCATTAATTCATGA 612 0.366 MSTTQRSESIHSFFDGYVHHSTTLEQFVNQCDNALRDRAEKEFQADFQSLNRTMSSNTKSPIERQFQANYTHKKMKEVQAEFRATTDCHASLTLQQGCTCTYNVVENIIFGDRPKEVEFIVVFNRENHDIKLEHEIIRDMKEKLSYIALDYEQELMTAKTNNSVKRYKLPDGRVISIGDECFKRAEVLFQPSFIQSKELGINS. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00170 203 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 101 IPR031052 GO:0006355
Seca2g00170 203 Gene3D Actin; Chain A, domain 4 122 201 - -
Seca2g00170 203 Pfam Actin 125 198 IPR004000 -
Seca2g00170 203 SUPERFAMILY Actin-like ATPase domain 122 201 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00170 Seca-Chr2 2516957 2518588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00170 133 202 Cytoskeleton Gene Families AT3G46520 66.197 8.72e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00170 - - mtr:112422163 172.17