Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00152 ATGGCCTTGCAGAACATTGGTGCCAGCAATAGCGATGATGCCTTCTATAGGTATAAGATGCCTAAAATGATTACAAAAATTGAGGGTAGAGGTAATGGCATCAAAACAAATATTGTCAACATGGTTGATATTGCAAAAGCGTTGGCAAGGCCAGCCTCTTACACAACAAAGTATTTTGGTTGTGAACTTGGAGCCCAATCAAAATTTGATGAGAAAACTGGGACTTCTCATGTTAATGGGGCACATGATACTGCAAAACTTGCTGGTCTTCTAGAGATTTTCATCAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCTTAATTACTAAGAATCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTGGATATGAGGGACAAGCTGACTACCTTCATCATTAAGAACCCTCCTGAAATCAAGAAAGGATCCAAAGACAAGAAGGCCATGCGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTAAAGCAGCTGATGAGGAGCTGAAAAAAATTAAGAAAGAGAGTAAGAAGAAAGGCACTACGTCTTCTAAGGATGGCACCACAAAATCTACCTCTTCAAGGAAGAAGGCAAATGGCTCTGATGAAGACCGGACATCTCCTACTCATAGTCAAGTTGATGAGAAGGATGAGGCTCAAGATGCAGAAGACGATGATGATGACGTACAATGGCAAACAGATACATCACTAGAGGCTGCTAGACAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACTAATGAACCAGAGAAGAAGAAGAAGGAGAAAGCAGCAAATAAGGTAAGTAATAATTCTGAGAATGGCAACTCCATGCACTACAGGACTCTGGTTGAGGAAGTCAAAGCAAATTTGAAGAAAGGTGCTAAAGCAGAAGAATTGCTGACCCATTTGGCAACACTTACTGGATCTGCTCAAGAAAAGATGAGTGCTCTGTATGAAGCCCTTTTCATGGGCATTGAGAAAGGGTTTGGAAAAGAAGCTCTCAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCTGAGGATGAGGGAATGCAGTTGTTATTGTTGCATGCAATTGAGGAATTTTCTTGCAAGTCTACTTCCAATGCATTAAAGGAGGTTGCTCTGGTCTTGAAGGCTCTCTATGATGCTGATGTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAGAAAGGGCTGAATGGCGATAACAAGAACTCCCAGATTTGGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAATGCCGAATCAGAATCGGAGGAAGAATGA 1338 0.4208 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEIKKGSKDKKAMRRAEKERLKEGKAADEELKKIKKESKKKGTTSSKDGTTKSTSSRKKANGSDEDRTSPTHSQVDEKDEAQDAEDDDDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNEPEKKKKEKAANKVSNNSENGNSMHYRTLVEEVKANLKKGAKAEELLTHLATLTGSAQEKMSALYEALFMGIEKGFGKEALKKKSYLAAAVAEDEGMQLLLLHAIEEFSCKSTSNALKEVALVLKALYDADVLEEEHIVQWYQKGLNGDNKNSQIWKNAQPFIDWLQNAESESEEE. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00152 445 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 444 IPR045196 GO:0003743|GO:0006413
Seca2g00152 445 Gene3D - 285 445 - -
Seca2g00152 445 MobiDBLite consensus disorder prediction 267 291 - -
Seca2g00152 445 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Seca2g00152 445 SMART 542_3 353 441 IPR003307 GO:0005515
Seca2g00152 445 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Seca2g00152 445 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Seca2g00152 445 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Seca2g00152 445 Pfam eIF4-gamma/eIF5/eIF2-epsilon 367 445 IPR003307 GO:0005515
Seca2g00152 445 MobiDBLite consensus disorder prediction 149 225 - -
Seca2g00152 445 ProSiteProfiles W2 domain profile. 288 445 IPR003307 GO:0005515
Seca2g00152 445 SUPERFAMILY ARM repeat 295 439 IPR016024 -
Seca2g00152 445 MobiDBLite consensus disorder prediction 268 282 - -
Seca2g00152 445 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Seca2g00152 445 Gene3D - 105 145 - -
Seca2g00152 445 CDD W2_eIF5 298 443 - -
Seca2g00152 445 MobiDBLite consensus disorder prediction 149 238 - -
Seca2g00152 445 FunFam Eukaryotic translation initiation factor 5 291 436 - -
Seca2g00152 445 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Seca2g00152 445 Gene3D - 2 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00152 Seca-Chr2 2303114 2306107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00152 1 438 Eukaryotic Initiation Factors Gene Family AT1G36730 64.062 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00152 K03262 - gmx:100777906 677.552