Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00128 ATGAAACCTCTGCTTCAGTACCCTTGTTCCATTTCCATTTTAATTTTCTCGGTTATTACACTTGTCATCTCAATCAATATTCCAACATCTCTTGGTGAGGATGATAGCCTCTACTACACCAACTGCAGTAACGCTTTTACCTGCGAAGGCAGCAATATCGAAACTCTCAAGTATCCATTCTTTGGAGGAAACAGAGATTCGTATTGCGGTCAACCTGGCTTGGATCTCATATGCGAAGATAGTGCCCCCAAGATGAATATCAATTCCATCAAATACCGTATTCTTGATTGGGACAACACAACACAGAAGCTCACAGTCGCTAGGGATGATTATTACTCGAGTAATGTCTGTTCTGTGAGTGATTACAAGAACACCACATTTGATAACACATTGTTTCAAATTCAGTATGATGGTGGGTTTGTTACGCTGTTATACGGTTGCACTTCAACAGAAAACTTCCAGAATCAGAATCCGTATCGTAGTGACTGCGGTGAAAATAAAACTGTATACTACGTTCTTGCACCTTTGTATTCGCCCCTTTGTAGTGCGAGTATTGTGATTCCCATTTTGGGACAGCAAGTTTCATCACTTGTATCTTCCAATAGAATAGACGATGCATTAAAGCAAGGTTTTGAGCTGAGTTGGACCGGAGATTATAAGCAGTGCACGGCATGTATTGAATCTGGTGGAGAGTGTGGCTATGACAGCGGAGAATTCAGATGCTTCTGCAAAGATGGAACTCATACATCTTCTTGCCATTCAGATAGGGCCAAAGATCCACGTATGTCCAATCACTTTCTCATACTAACTCTCCTATCTTTTTTTTCTCTAACTAGCCCTAAAGTTTTAATGGGTCCAAATCCAAACTTCAGTCATTCTTTTATTTGGATTATTACTTCTTCATTTGATTGTGCAAATCTTAAAAACCTGAGCTATCCTTTCTGGGGGTCTACTAGACCCCAATACTGTGGCCACCCTGCATTTAAGCTAGAATGCACTGGTGAAGTAGCAAGAGTTACCATTATGTCAGAGAGTTACAGAGTTCTTGAAGTCAGTGATTCTAATCATGGACTCAAAGTTGTAAGAAATGACTACTGGAATAATATTTGTCCCACAACCCTCAAGAACACCACTTTAGGTTGCAGTTTCTTTGATTATGGTTCGGATTCTCAGAACCTGACTCTCTACTATGATTGTCCTTCCCCTGCTTTTCCTCTACCGGATAGCTTTTCCCCTCAGTTTAATTGCAGTATAAATGGAACTCAAATGCTTAACTATTTTGTGATGGAGAACATCCTTGAAAATGCTGAGACTTCGGTCTCATTGAGTGAGAGTGAGATAATGGGAACATGCAAATCTAGGGTCATTGTTCCAATTTTGGAGTCAGAAGCTAAAGTGATAGAGACAAATTCAACCGTGGAAAATCTGAATTGCCACAACACGACCTTCAACTGCGGCACCATAACCAACCTTTCCTACCCTTTCACCGGTGGTGACCGCCCCTCCTTCTGTGGGCCACCACAGTTCCACTTAAGCTGCAACAACGGTGTTCCTGAGTTGAACATATCCTCAGTGAGTTACCGAGTCCTTCAAATCAGCTCAGTAACTCGCACCCTCACCTTAGCAAGATTAGACCTTTGGAATAACACATGTACCCATAACTACGTTAACTCAACTTTCGATGAGACCATATTTAGCTATGGTTCAGGCAACCGGAACCTCACCTTGTTCTATGGGTGCAAAACCACTACTCAATTGACCAGTACGCCAAATAATTTGTTTCACTGCGAGATTAATGGGAATAAGAGTGATTCTTATTCTTTAGTTGGTCCATTTCCTTTGGACCCTGTTCTTAGCATTGTTACATGTGATGATAGTGTTGGGGTGGCAATTCTGGAAGAGCAGGTTAATAGGCTTGTAAACAACCGCTCTTTGCTTAGGGAGATTTTGATGAAGGGATTTAATGTGAATTATAGCAATCCTTATGACAATGAATGCTCTGAGTGTCTTGGTTCTGGTGGCCAACAGTGTGGGTTTGATTTTGATGAGAATGAACCAATTTGTATTTGTGGCGATCGGTTGTGTACATTTTCAGAAAATAAAATGTTACTGATCTCTATCATTATTATCTGTTCAGGCGTTGTTGCAGGAGTTGCAGCCCTTGTTGGCATTCTTTGCTGTGTGTGCTTTATGGTGAGAAGAAAGAGAAGAATTGCTAAGCAATCAACAAGCAAGGACCTCCTCATGCATAATTCAAGCAGTGTCGCTCTTACCTCTACTACTAATTCGTCTCAAACTCAAAGTGTCTCTTCTTACCCTTCTTCCAAGTCTGGCACAGTACCAAGGAGTTACTACTTTGGTGTTCAGGTGTTTACTTATGATGAACTAGACGAAGCTACCAAAAATTTTCACACTTCAAGAGAACTTGGTGAGGGAGGTTTTGGCACTGTTTACAAAGGTGAACTCAAAGATGGACGTGTGGTTGCTGTGAAACGTCATTATGAAAGCAATTTTAAGCGTGTTGAGCAGTTCATGAATGAAGTTGAGATTCTAGCCCGGTTAAGGCATAAGAACCTGGTGACACTCTATGGATGCACCTCAAGACAAAGCAGAGAACTTCTCCTTGTTTATGAATTCATACCTAATGGAACTGTGGCTGATCATCTTCATGGAACACGATCAAAATCAGCTTTACTTCCTTGGCCTGTAAGATTGAACATTGCAATAGAAACAGCTGAAGCACTAGCCTACCTCCATGCATCAGATGTCATACACCGTGATGTTAAATCCAACAACATTCTCTTAGATGATAAATTTCATGTTAAGGTTGCTGATTTTGGCCTCTCACGGTTGTTCCCAAATCATGTCACTCATGTTTCAACTGCTCCACAGGGTACCCCTGGTTATGTTGACCCTGAGTATTATCAGTGCTACCAACTCACTGATAAAAGTGATGTTTATAGCTTTGGGGTTGTCTTAGCTGAGCTCATATCATCATTACAAGCTGTGGACATTAGCAGGCATCGCAGTGATGTGAACTTAGCTAATATGGCTGTCAACAAAATTCAGAACCAAGAATTGCATGAGTTGGTTGATCCATATATTGGATTTGAAAAAGACCCTGCTGTGAGGAGGATGACAACAGCAGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAGCAGAGAGACATGAGACCTTCCATGGATGAGGTGTTGGAGATCTTGAGAGCAATCAAGAGTGATGAGCTTGACACAAGGGAAGCAAAAGTAGTGGATGTTAGGACAGATGAACTTGTACTTTTGAAGAAGGTTCCTTCCCCGGTTTCACCAGATTCAGTTGCTGATCATAAATGGGTTAGCGGCTCTTCCACTTCTACATCTTATTCCTCATAG 3393 0.4147 MKPLLQYPCSISILIFSVITLVISINIPTSLGEDDSLYYTNCSNAFTCEGSNIETLKYPFFGGNRDSYCGQPGLDLICEDSAPKMNINSIKYRILDWDNTTQKLTVARDDYYSSNVCSVSDYKNTTFDNTLFQIQYDGGFVTLLYGCTSTENFQNQNPYRSDCGENKTVYYVLAPLYSPLCSASIVIPILGQQVSSLVSSNRIDDALKQGFELSWTGDYKQCTACIESGGECGYDSGEFRCFCKDGTHTSSCHSDRAKDPRMSNHFLILTLLSFFSLTSPKVLMGPNPNFSHSFIWIITSSFDCANLKNLSYPFWGSTRPQYCGHPAFKLECTGEVARVTIMSESYRVLEVSDSNHGLKVVRNDYWNNICPTTLKNTTLGCSFFDYGSDSQNLTLYYDCPSPAFPLPDSFSPQFNCSINGTQMLNYFVMENILENAETSVSLSESEIMGTCKSRVIVPILESEAKVIETNSTVENLNCHNTTFNCGTITNLSYPFTGGDRPSFCGPPQFHLSCNNGVPELNISSVSYRVLQISSVTRTLTLARLDLWNNTCTHNYVNSTFDETIFSYGSGNRNLTLFYGCKTTTQLTSTPNNLFHCEINGNKSDSYSLVGPFPLDPVLSIVTCDDSVGVAILEEQVNRLVNNRSLLREILMKGFNVNYSNPYDNECSECLGSGGQQCGFDFDENEPICICGDRLCTFSENKMLLISIIIICSGVVAGVAALVGILCCVCFMVRRKRRIAKQSTSKDLLMHNSSSVALTSTTNSSQTQSVSSYPSSKSGTVPRSYYFGVQVFTYDELDEATKNFHTSRELGEGGFGTVYKGELKDGRVVAVKRHYESNFKRVEQFMNEVEILARLRHKNLVTLYGCTSRQSRELLLVYEFIPNGTVADHLHGTRSKSALLPWPVRLNIAIETAEALAYLHASDVIHRDVKSNNILLDDKFHVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLAELISSLQAVDISRHRSDVNLANMAVNKIQNQELHELVDPYIGFEKDPAVRRMTTAVAELAFRCLQQQRDMRPSMDEVLEILRAIKSDELDTREAKVVDVRTDELVLLKKVPSPVSPDSVADHKWVSGSSTSTSYSS. 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00128 1130 SMART serkin_6 803 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00128 1130 CDD STKc_IRAK 809 1075 - -
Seca2g00128 1130 Pfam Wall-associated receptor kinase galacturonan-binding 42 108 IPR025287 GO:0030247
Seca2g00128 1130 Pfam Wall-associated receptor kinase galacturonan-binding 478 542 IPR025287 GO:0030247
Seca2g00128 1130 Pfam Wall-associated receptor kinase galacturonan-binding 303 361 IPR025287 GO:0030247
Seca2g00128 1130 MobiDBLite consensus disorder prediction 1116 1130 - -
Seca2g00128 1130 Pfam Wall-associated receptor kinase C-terminal 617 692 IPR032872 -
Seca2g00128 1130 Pfam Wall-associated receptor kinase C-terminal 180 246 IPR032872 -
Seca2g00128 1130 Gene3D Transferase(Phosphotransferase) domain 1 880 1092 - -
Seca2g00128 1130 MobiDBLite consensus disorder prediction 1106 1130 - -
Seca2g00128 1130 FunFam Wall-associated receptor kinase-like 20 880 1088 - -
Seca2g00128 1130 Coils Coil 629 649 - -
Seca2g00128 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Seca2g00128 1130 ProSiteProfiles Protein kinase domain profile. 803 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00128 1130 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 471 1123 IPR044652 GO:0004672
Seca2g00128 1130 SUPERFAMILY Protein kinase-like (PK-like) 780 1081 IPR011009 -
Seca2g00128 1130 ProSitePatterns Protein kinases ATP-binding region signature. 809 831 IPR017441 GO:0005524
Seca2g00128 1130 MobiDBLite consensus disorder prediction 758 778 - -
Seca2g00128 1130 Gene3D Phosphorylase Kinase; domain 1 777 879 - -
Seca2g00128 1130 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 782 879 - -
Seca2g00128 1130 Pfam Protein kinase domain 803 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00128 Seca-Chr2 1960735 1968222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00128 771 1124 Receptor kinase-like Gene Family AT1G25390 61.264 4.55e-142 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca2g00128 Pkinase 3.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00128 - - cam:101490779 1003.43