Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00114 ATGAATGATTCTACGGTGAAGAGTTTGGCCATTGCGGATAAGAAGGTGCAAAAACCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAGACTCTCTAAGAAAAAGCTCTTCTCCAAGAAACTCCTTCCTCCTGCTCGTGCAAAAAAGTTTAGGGGAGATGAAAAAATGCCAAGTTCCAAGCTCCACTTGATTGCTAATGAGAACAGTGGAGGATTCCCTAGTGCCAGAAAAAGTGGGAATCATGGTGTAATTGTAGATCAAAAGAGTGAAATGCGAGTTCCGAGTTTGGTAGCTAGGTTGATGGGTCTAGAATCTATTCCATCAGCTCAGCGAGATAAGTCTAAGAAAGCTTTATGTTCTGATAGTTGTGGTGATGGAAAGAAAGAGTCTTTGGCTAATCATTTTGAGTTGGATAGGCAAGGTGTGGATTTAGAAGTGGGAGTTGTAAAGCATGATTCAAGACCTCAGAAACTTCAGAAAACTGGGGCATGTGAGAGAAAGGCAGTGACTAGGTTTGGGCCAGAAGCCCTTCATATTAGGAGTGTTTTGTCACGAGCAAAAAAGTATAACCACCAACATCATCATCCAAAGCTTGCTTCTCCTTTGAAGAGCCCAAGAATTACTTCTGGAAAAAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCAGGCTAGAAGTAGAGCTAAAGGTTCTCTTACATATCCTGCTTCCATGTATCCTCCTAAAACTGGCATTGTGACAAATGGTGCAGGAAATAAGTCAGTAGTTATGCAAAACCAATCTTGTTATGATGCCACCACAACCAAGCCTTTGATGGGGCAAACTTCTTGCAAAAATTGTGGTAATTTGCTTGATGTTATTGACTCCAAGCCAGTGGTTGGGGGACAGCCAGCATTTCCTCCACCAATTGTTTCAGATGTGATCACTGCTACCTCTATGGTATCATCACAGAAGGTGGGGAAATCATTAACTCCCTCTCATGGACAAGAAAGAGACATTGTTCTTTTGAGAAGTCAGGAAAAGCTCATATCTCTTGTTACTGAAGATGAGGGTAAGAATAATGCACAACAGTCATGGAATGAAGCTGCTAGTGCTACCAGAAGAATGCCAATGCCCCATGAAGGTCCAGCTAAATGGAATTCATCATGCCAACCATTGAGGGGCCTAGAGGACAATGCATCTTCTTTTGCCTTAAAACACAAAACTCAGACACAAGAACAGATATTAAGCAGTGAAAGATATTCATCTGGATCTACAATGAGTAATGTGCATGTAAAAAGAGTATCATCGTCTGCGAGCACCATGAGTGGGAGTGGGACTAAAGACTTTGTTGCTTTGAATAGAAGCCTAAGTGGTCGAACGAGGATGAGGTCACCTACCAAAATGGATAATTCCAAATTTGACTTAGAGAAAAAACCTTGTAATAGACAGCATAATTCCTTGTCTCATGTAAGGACATTAGAGAGGAAAAGAAGGATCCCAAATGTCACACAACTTGAAGGCACAGCTTCTGTTAATTCAGTTGGTGTGAAACAGAAAAATCTACATTCCAATGCAGTGGGTGGAAAAAGGAGGGACTTTGACTCTTCCTCCTCAAACAGTTCTAATGTTAAAAATGAACGAGATGGTCAGGGAGAAACAAAGAAGGTTCATGACAATAAGATCAAGGATGTAGTTTCATTCACATTTAATTCCCCCTTGAGGCAAAAGATAGGAATACTTGCTGAGAAGGAAGAGACAAGCAGTGACAATGAGAGGAGGACATACTTCCAAAGACCTTCACCCTTGAAAATTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAGGAATTAACCTCTCAAGAAAATGAGGAGCTGGCTACAGGTGCTCTACCTGAAAAATCAAGTACCATGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCAGAGCATTTGATTTGTCATGGTGGTCATATGTTTAATGAAAACTGTGGTTTCCATTGTGGGGCAAAACAAGAATGTTTATTAGGAACCTCTTTCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGGTTTTCACCCTGACTCCATGAATTACTCACATGGTCAACTGGAACAATTGGAACATGATACTGAACTTGTAGATTCTGCAACATCTTTTAACAAAGGAAGGATAGTTGAGATCCTGACTGATCTTGTCAACCAAATTCCTAGAGCATTACAATGTCTATATTCTTTTGGGACACAATTGACAAGAAGCAAGCTCAACAATATGAAGGATGTTCTCTTGAATGCTGAATTGGTGCTTGGAATTGCAACTGACCACAATGAGGATGAAGTGCCACAACTTTTAATTTATCAGTTTCTCCTTCATGAATTGGACACTATGGCAGGTGATGCTATGTGGACAGAGTTTAATGGCTTTATGGGTCGTGAGGATTCTAAACAGAGAGAGAAACTCAAAGGATTTGTCTTTGATTGTGTTATGGAATATCTAGAATCAAATTGTTGCCAATATTTTTACTCTGGATTCAAGGTATGGATTAAGCTCCCATTATGCATAAAAGCTGAGATGTTGGCTCAAGAGGTTAAGAGGGAGATCAAGAACTGGGCAGGTATGGCTGGGATGGTACCTGACAAAATAATAGAATGGGAGATGAGCCACTCCCTGGGGAAATGGACTAACTTTGATATTGAAGCATTTGAGGCTGGTGTCGATATAGATGGGGACATACTTCAAATTTTGGTTGATGAAATTGTTGAAGATCTTGGAGGTTGCAAGCAGAGCTCTATTTCCTTCTAA 2874 0.4064 MNDSTVKSLAIADKKVQKPGGCVGIFFQLIDWKRRLSKKKLFSKKLLPPARAKKFRGDEKMPSSKLHLIANENSGGFPSARKSGNHGVIVDQKSEMRVPSLVARLMGLESIPSAQRDKSKKALCSDSCGDGKKESLANHFELDRQGVDLEVGVVKHDSRPQKLQKTGACERKAVTRFGPEALHIRSVLSRAKKYNHQHHHPKLASPLKSPRITSGKSASRSSRLIGAATKILEPGLQARSRAKGSLTYPASMYPPKTGIVTNGAGNKSVVMQNQSCYDATTTKPLMGQTSCKNCGNLLDVIDSKPVVGGQPAFPPPIVSDVITATSMVSSQKVGKSLTPSHGQERDIVLLRSQEKLISLVTEDEGKNNAQQSWNEAASATRRMPMPHEGPAKWNSSCQPLRGLEDNASSFALKHKTQTQEQILSSERYSSGSTMSNVHVKRVSSSASTMSGSGTKDFVALNRSLSGRTRMRSPTKMDNSKFDLEKKPCNRQHNSLSHVRTLERKRRIPNVTQLEGTASVNSVGVKQKNLHSNAVGGKRRDFDSSSSNSSNVKNERDGQGETKKVHDNKIKDVVSFTFNSPLRQKIGILAEKEETSSDNERRTYFQRPSPLKIDALGAFLEQKLKELTSQENEELATGALPEKSSTMILQELISALSSEHLICHGGHMFNENCGFHCGAKQECLLGTSFNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSMNYSHGQLEQLEHDTELVDSATSFNKGRIVEILTDLVNQIPRALQCLYSFGTQLTRSKLNNMKDVLLNAELVLGIATDHNEDEVPQLLIYQFLLHELDTMAGDAMWTEFNGFMGREDSKQREKLKGFVFDCVMEYLESNCCQYFYSGFKVWIKLPLCIKAEMLAQEVKREIKNWAGMAGMVPDKIIEWEMSHSLGKWTNFDIEAFEAGVDIDGDILQILVDEIVEDLGGCKQSSISF. 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00114 957 MobiDBLite consensus disorder prediction 521 565 - -
Seca2g00114 957 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 946 - -
Seca2g00114 957 MobiDBLite consensus disorder prediction 473 509 - -
Seca2g00114 957 MobiDBLite consensus disorder prediction 538 554 - -
Seca2g00114 957 MobiDBLite consensus disorder prediction 462 509 - -
Seca2g00114 957 Pfam DUF761-associated sequence motif 91 117 IPR032795 -
Seca2g00114 957 MobiDBLite consensus disorder prediction 192 221 - -
Seca2g00114 957 Pfam Domain of unknown function (DUF4378) 783 942 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00114 Seca-Chr2 1831724 1837334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00114 1 947 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.072 3.62e-88 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00114 - - aprc:113861902 1420.6