Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00091 ATGGCTATGGTGGTCCTCACAATCCTTTTGGCCATACTCTTGGCTCTGCTATTTAAACTTGTCTATGAAAACCTCTCATGTTACTTTCTCACTCCACTACGCATCAAGAGAATCATGGAGATGCAAGGTGTTCGTGGTCCTAAACCTCGCTTCTTCACTGGCAATATCTTAGACATGGCTTCTCTTGTTTCCAAAACAACCTCTCAAGACATGAAAACCATAAGCCATGACATTGTTGGCCGTCTTCTACCACATTTTCTTCTCTGGTCCACCCAATTTGGAAAGAGATTCCTATATTGGAATGGAATAGAACCAAGATTGTGCCTCACAGAGACAGAATTGATCAGAGAGTTTCTTTCAAAACACAGTACAGTATCTGGGAAATCATGGCAACAAAGGCAAGGTTCAAAACATTTCATTGGGGAAGGACTTTTGATGGCAAATGGTGAAGAATGGTACCACCAACGTCACATCGTTGCCCCTGCATTCATGGGAGACAAACTTAAGAGCTATGCTGGACATATGGTGGAATGCACTAAGGAGATGCTCCAATCACTAGAAAATGCGTGTGCTTGTGGTCAAAGTGAAGTGGAGATTAGCCACTACATGACTGAACTCACTGCAGATATTATTTCTAGAACTGAGTTCGGTACAAGTTATCACAAAGGAAAGAAAATATTCCATCTCCTCACACTGCTGCAGACTCGTTGTGCTCAAGCAAGTCGTCATCTTTGCTTTCCTGGAAGCAGGTTTTTACCAAGCAAGTATAACAGAGAGATAAAGGGTTTAAAGATGGAGGTGGAGACTTTGTTGATGGAGATAATACAAAGCAGGAAAGACTGTGTGGAGATTGGTAGAAGCAATTCTTATGGTAATGATTTGTTGGGTATACTCTTGAATGAGATGGAGAAGAAGGAGAAGAAAGGGAATGGGAATAGCTTAAATCTGCAGCTGGTTATGGATGAATGCAAAACATTTTTCTTTGCTGGACATGAAACCACTGCTCTTTTACTCACTTGGACTGTTATGTTATTAGCAAGCAATCCATCTTGGCAAGACAGAGTCAGAGATGTGGTTAAAAGAGTCTGCAATGGCAAAACTCCCTCAGTGGATCAACTCTCCAAACTCACTCTTTTGCATATGGTAATCAATGAGTCAATGAGGCTATATCCCCCAGCATCTGTGCTCCCTAGAATGGCCTTTGAAGACATGGTGTTGGGTGACCTTTATATCCCTAAAGGGTTATCAATTTGGATTCCTGTGTTGGCTATTCATCATAGTGAAAAACTGTGGGGTAAAGATGCAAATGAGTTCAACCCAGAGAGGTTTACTTCAAAATCTTTCATTCCGGGCCGTTTTTTACCATTTGCTTCTGGGCCTAGAAATTGTGTGGGACAAGCATTTGCCTTAATGGAAGCTAAGATTATATTAGCCATGTTGATCTCAAAGTTTAGCTTCACAATTTCTGAGAATTACCGTCATGCACCTGTGGTTGTCCTCACAATTAAGCCCAAATATGGGGTTCAAGTTTGTTTGAAGCCCTTGGAGCCATGA 1554 0.4157 MAMVVLTILLAILLALLFKLVYENLSCYFLTPLRIKRIMEMQGVRGPKPRFFTGNILDMASLVSKTTSQDMKTISHDIVGRLLPHFLLWSTQFGKRFLYWNGIEPRLCLTETELIREFLSKHSTVSGKSWQQRQGSKHFIGEGLLMANGEEWYHQRHIVAPAFMGDKLKSYAGHMVECTKEMLQSLENACACGQSEVEISHYMTELTADIISRTEFGTSYHKGKKIFHLLTLLQTRCAQASRHLCFPGSRFLPSKYNREIKGLKMEVETLLMEIIQSRKDCVEIGRSNSYGNDLLGILLNEMEKKEKKGNGNSLNLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQDRVRDVVKRVCNGKTPSVDQLSKLTLLHMVINESMRLYPPASVLPRMAFEDMVLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFTSKSFIPGRFLPFASGPRNCVGQAFALMEAKIILAMLISKFSFTISENYRHAPVVVLTIKPKYGVQVCLKPLEP. 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00091 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 Pfam Cytochrome P450 91 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 29 507 - -
Seca2g00091 517 SUPERFAMILY Cytochrome P450 46 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 Gene3D Cytochrome P450 29 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g00091 517 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00091 Seca-Chr2 1579964 1584377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00091 1 377 Cytochrome P450 AT5G38450 64.380 1.11e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00091 K10717 - gmx:100808392 917.146