Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00043 ATGCTAGAGGTATACACCACACATAGTTATACGTTACATTTAAACCTTAATAAACATTGGTTGGAATTGGTTAAAGCCTATACATACTTTGCTTTTTGTGGATTTCAGGGAGCCATAACTCACCAAGATTTTGCTGGCCACAAGGGTACAATAAGAACTGGTGATGTTCAGTGGATGACTGCAGGCAGGGGAATAGTTCACTCAGAAATGCCTGGAGAAGCAAACAACAAGGGATTGCAACTATGGATCAATTTATCAGCCAAGGACAAAATGATTGAGCCTAATTATCAAGAACTGCCAAGTGAGAACATACCAGGAGCAGAAAAAGATGGGGTTGAAGTGAGAGTTATAGCAGGAGAAGCAATGGGAGTCCATTCACCTGTCTACACAAGAACTCCTACCTTGTTCCTTGATTTCTCTATGATGCCTGGAGCTCAGTGGCATCAGAGTATTCCAGAGAGTTGGAATTCCTTTGTATATGTAATTGAAGGGGAAGGAGTTTTTGGGTCTCCAAATTCATCACCAACTATGGCACACCATGTCTTGGTTTTAAGTCTAGGGGATGGCCTTAGTGTCTGGAATAACTCCTCAAAGCCTTTGAGGTTTGTGCTAATTGGAGGACAGCCACTTAATGAGCCAGTGGCTCAGTATGGGCCTTTTGTGATGAATACACAGTCTGAAATTGAGAAAACTATTGAAGACTATCAATATGCCAAGAATGGGTTTGAGATGAGGAAATATTGGAGATCTCAGTAG 756 0.4153 MLEVYTTHSYTLHLNLNKHWLELVKAYTYFAFCGFQGAITHQDFAGHKGTIRTGDVQWMTAGRGIVHSEMPGEANNKGLQLWINLSAKDKMIEPNYQELPSENIPGAEKDGVEVRVIAGEAMGVHSPVYTRTPTLFLDFSMMPGAQWHQSIPESWNSFVYVIEGEGVFGSPNSSPTMAHHVLVLSLGDGLSVWNNSSKPLRFVLIGGQPLNEPVAQYGPFVMNTQSEIEKTIEDYQYAKNGFEMRKYWRSQ. 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00043 251 Gene3D Jelly Rolls 105 210 IPR014710 -
Seca2g00043 251 Pfam Pirin 35 83 IPR003829 -
Seca2g00043 251 SUPERFAMILY RmlC-like cupins 35 249 IPR011051 -
Seca2g00043 251 PIRSF Pirin 33 249 IPR012093 -
Seca2g00043 251 Gene3D Jelly Rolls 35 236 IPR014710 -
Seca2g00043 251 PANTHER PIRIN-RELATED 35 251 IPR012093 -
Seca2g00043 251 CDD cupin_pirin_C 133 209 - -
Seca2g00043 251 Pfam Pirin C-terminal cupin domain 136 241 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00043 Seca-Chr2 707036 708418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00043 9 246 Calmodulin-binding Proteins AT3G59220 60.000 3.27e-101 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00043 K06911 - gmx:100775597 389.037