Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00038 ATGAAGGAAAAAGGGAATAAGAAAGGGCTTATCACCAAAACATGGGAGCGATGCAAGTCGATAGGATCATCAAAGTCGTCAAAGAGGAGCAAATCGTGGCCAAGGCGAGGCAAGAAGAAGAATAAGAGTACTAGTAGTGTAGTGGCCCCTGAAGGTTGCTTCTCTGTGTATGTTGGGCCTCAAATGCAAAGGTTTGTGATAAAAGCAGAGTATGCTAACCACCCTTTGTTCAAGATGTTGCTTGAAGAAGCAGAGTCAGAATACGGTTATAACAGCCAAGGCCCTTTAGCCCTTCCTTGTAACGTTGATATGTTTTACAAGGTGTTGATGGAAATGGATGAAGAACAAGATCAGGAGTACATTACTACTACTACCACTAATCCTCATCAAGGCTGTACTAGTGTTTTATTTGGGAAACGTTCTCGCAGCTCTTATCATCTTCTTAGCCCTTCGCGAATGCTTCTCATAAACAACTTCTGA 480 0.425 MKEKGNKKGLITKTWERCKSIGSSKSSKRSKSWPRRGKKKNKSTSSVVAPEGCFSVYVGPQMQRFVIKAEYANHPLFKMLLEEAESEYGYNSQGPLALPCNVDMFYKVLMEMDEEQDQEYITTTTTNPHQGCTSVLFGKRSRSSYHLLSPSRMLLINNF. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00038 159 Pfam Auxin responsive protein 23 109 IPR003676 GO:0009733
Seca2g00038 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 109 IPR003676 GO:0009733
Seca2g00038 159 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00038 Seca-Chr2 639761 640240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00038 49 109 Calmodulin-binding Proteins AT3G43120 47.541 1.73e-17 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00038 2 639761 640240 Seca2g00038 2 639761 640240 ECH