LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g00035	ATGGATAAGATCAATTTTGTGAAGAATGGGGAGCTTAGATTGCCTCCTGGATTCCGTTTCCACCCAACTGATGAGGAACTTGTTGTTCAATACTTGAAGCGTAAGGCCTTCTCTTGCCCTCTCCCTGCCTCTATCATTCCTGAGGTTGATGTTTGCAAGTTGGATCCTTGGGATTTGCCAGGTGTGGTGGGTTTAGGTGATTTGGAGCAAGAAAGGTACTTTTTCAGCACCAAAGAGGCCAAATATCCTAATGGGAACCGATCCAACAGAGCTACCAATTCAGGTTACTGGAAGGCAACTGGGTTGGACAAACAAATTGTAACTTCTAAAGGGAACCAAGTTGTGGGGATGAAGAAGACTCTGGTTTTCTACAGAGGAAAGCCACCTCATGGATCAAGAACTGATTGGATCATGCACGAATATCGCCTCCACAACACTTCCTCTCAGACTCAGGTGAGGATTGCTATTGGATTTAACAATTTAACAATCAATACCGTTGTGCAGAAGCAGAGCCATGTGGAAAATTGGGTTCTATGTCGCATATTTTTGAAGAGGAGAGGCAGTGCTAAAAGTGGGGGTGAAGGCATAGAAAGCATAGATAACATTAGCCACAACAAGGTGAGAAACTCTAGGGTGGTTTTCTATGACTTCTTGGCACAGAACAAGACTTCTTCCTCATCCAGTGGCAGTGGAATCACAGAGCTTTCCACCAATGAATCTGATGAACATGAAGAACAGAGCAGTACCTCAAATACTAATAGCAATACTAATACCAAGACCCTCCCTTATTTTAGAAGAAAAACTTAA	807	0.4312	MDKINFVKNGELRLPPGFRFHPTDEELVVQYLKRKAFSCPLPASIIPEVDVCKLDPWDLPGVVGLGDLEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNTSSQTQVRIAIGFNNLTINTVVQKQSHVENWVLCRIFLKRRGSAKSGGEGIESIDNISHNKVRNSRVVFYDFLAQNKTSSSSSGSGITELSTNESDEHEEQSSTSNTNSNTNTKTLPYFRRKT.	269

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Seca2g00035	268	Pfam	No apical meristem (NAM) protein	15	143	IPR003441	GO:0003677\|GO:0006355
Seca2g00035	268	PANTHER	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	13	245	-	-
Seca2g00035	268	ProSiteProfiles	NAC domain profile.	14	184	IPR003441	GO:0003677\|GO:0006355
Seca2g00035	268	Gene3D	NAC domain	23	188	IPR036093	GO:0003677\|GO:0006355
Seca2g00035	268	MobiDBLite	consensus disorder prediction	222	268	-	-
Seca2g00035	268	MobiDBLite	consensus disorder prediction	222	236	-	-
Seca2g00035	268	MobiDBLite	consensus disorder prediction	247	262	-	-
Seca2g00035	268	SUPERFAMILY	NAC domain	10	184	IPR036093	GO:0003677\|GO:0006355

Showing 1 to 8 of 8 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g00035	Seca-Chr2	600515	602125	Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca2g00035	1	224	NAC Transcription Factor Family	AT5G13180	56.485	1.69e-92	271

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NAC	Seca2g00035		NAM	1.6e-36	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g00035	-		-	gmx:100170709	341.658

Showing 1 to 1 of 1 entries