Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00011 ATGATTCACACGTTGTTCTTCATACCCGTGGTGTCTAGAGGATTAAGGGCATCATATAGGTACCTATATCTTACCTTACTTCTCTTCTCTTCTCTACCTTACATATCCAAATCCAATTTAATTGCATTGCAGGTGTCAAGATCTATTGGTGATGTGTATCTCAAGAGACCTAACTTTTACAGAGACCCGGTTTTTCAGCAATTTGGAAATCCCATTCCTTTGACTCGTCCTGTAATGACAGCTGAACCTTCCATCACTGTTAGGGAGCTTCAACCGGAAGATCTGTTCATCATATTTGCATCCGACGGACTTTGGGAACAATTAACTGATCAAGAAGCGGTTGACATTGTTTTCAAATATCCCAGAGTCTTAATTAATCTAATCTCATATCATCTGATATGTGCTCGCTCGCAGGGAATTGCCAAGAGATTAGTGAGAGCTGCTCTTCAAGTAGCTGCAAAGAAGAAAGAGATCAGATATGACGACTTAAAGAAGATTGACAAGGGAATCAGACGGAATTTTCATAATGATATCACTGTTGTTGTCATCTATCTTGATCACCACAACCACAACCTCTCCACCTCTAAGCATCGCTCTACAACTGCTCCTCTGTTGACATTTACTCCCCAGACGACGGGGAAACAGAACAGTGTATGCTTGCCGCAGTTGCCTAAACCTAAACAAACACAAGAGTACGTCCAATTGCTTCACACACAATTTCATACGAATATTGAGGAACTGGAAGTTGCTGTCAGATTCTCGCCAGCTGATGCAGTTCACCATTATGTATAG 792 0.4141 MIHTLFFIPVVSRGLRASYRYLYLTLLLFSSLPYISKSNLIALQVSRSIGDVYLKRPNFYRDPVFQQFGNPIPLTRPVMTAEPSITVRELQPEDLFIIFASDGLWEQLTDQEAVDIVFKYPRVLINLISYHLICARSQGIAKRLVRAALQVAAKKKEIRYDDLKKIDKGIRRNFHNDITVVVIYLDHHNHNLSTSKHRSTTAPLLTFTPQTTGKQNSVCLPQLPKPKQTQEYVQLLHTQFHTNIEELEVAVRFSPADAVHHYV. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00011 263 SUPERFAMILY PP2C-like 42 187 IPR036457 -
Seca2g00011 263 Pfam Protein phosphatase 2C 42 119 IPR001932 -
Seca2g00011 263 CDD PP2Cc 43 185 IPR001932 -
Seca2g00011 263 Gene3D - 37 196 IPR036457 -
Seca2g00011 263 PANTHER PROTEIN PHOSPHATASE 43 186 IPR015655 GO:0004722|GO:0006470
Seca2g00011 263 ProSiteProfiles PPM-type phosphatase domain profile. 1 185 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00011 Seca-Chr2 311639 312471 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00011 43 203 PP2C-type Phosphatase Gene Family AT4G33920 60.976 9.06e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00011 - K01102 gmx:100812137 219.164