Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca1g06135 | ATGGTTACAGCAACAGCAACAGCCTCAGCTGAAAAGAAGACCTTCATAGTTCAAGTCCAGCATGAAGCTAAGCCTTCAATTTTCCCAACTCACAGGCACTGGTATCAGTCTTCCCTCGCATCCACCACTGACCCTAACTCCATTTCCAACTCCAACCCCATCATCCACACTTACCAAACTGTTTTTCACGGTTTCTCTGCAAAGCTCTCACCTTTGGAGGCCCACAAGCTCCAATCACTCCCTCACATCATAGCCCTCATCCCAGAGCAGGTTCGCCATCTCCACACCACGCGCTCCCCTCAGTTCTTGGGCCTCAGCACCGCTGACAGGGCCGGTTTGCTCAAGGAGACCGATTTCGGGTCGGATCTCGTAATCGGAGTCATCGACACCGGCATATGGCCCGAGAGGCAGAGCTTCAACGATCGTGATCTGGGTCCCGTTCCCCCCAAGTGGAAGGGCCAGTGTGTCGCCGGAAAAGACTTCCCGGCGACCTCATGTAACAGGAAGATCATCGGAGCTCGCTACTTCTGTGCTGGCTACGAAGCCACCAACGGGAAAATGAACGAGTCGTTGGAGTACCGTTCTCCTAGAGACTCAGACGGTCACGGAACTCACACAGCTTCGATCGCCGCCGGCAGGTACGTGTTCCCGGCGTCTACATTGGGCTACGCCAAAGGAATGGCAGCAGGGATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAAGTCTGCTGGAACGCCGGCTGCTACGACTCCGACATCCTCGCCGCATTCGACGCCGCCGTCGCTGACGGTGTAGACGTCGCATCCCTCAGTGTTGGGGGTGTGGTCGTGCCGTACCACCTCGACGTTATCGCCGTGGGGGCTTTCGGTGCCTCCGAGGCTGGTGTTTTTGTCTCTGCCTCCGCCGGCAACGGCGGTCCCGGCGGCCTCACTGTGACCAATGTGGCACCTTGGATGACCACTGTCGGCGCGGGAACCATAGACAGGGATTTCCCGGCGGATGTTAAGCTTGGGAATGGGAAGATCATAGGTGGGGTTAGTGTGTATGGTGGACCGGGTCTCACTCCGGGTCGGCTCTACCCGATTGTGCATGCGGGTAGTGAAAGTGGGGGTGATGGTTACTCTTCGTCACTTTGCTTGGAAGGTTCCTTGGATCCCAAGTTTGTGAGGGGGAAGATTGTTGTGTGTGACAGAGGCATCAATTCAAGAGCGGTTAAAGGTGAAGTGGTGAAGAAAGCAGGAGGAGTTGGCATGATTTTGGCCAATGGGGTGTTTGATGGTGAAGGTTTAGTAGCGGATTGCCATGTGCTGCCCGCCACCTCCGTCGGTGCCAGCGGCGGCGATGAGATTCGGAAATACATCTCAGCTGCTTCACAGTCACACTCGCCACCCACAGCAACAATAATATTCAAGGGCACTAGGCTTGGGATTAGGCCAGCGCCAAAGGTTGCAGCTTTTTCTGCTAGAGGGCCTAACCCAGAGTCCCCTGAGATTTTGAAGCCAGATGTTATAGCTCCAGGGTTGAACATTCTTGCAGCTTGGGTTCCTTCTGATGAGCGCAGGACAGAGTTTAACATACTATCAGGTACTTCCATGGCTTGCCCCCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCTGCACACCCTGATTGGAGTCCTGCTGCTATTAGGTCAGCACTCATGACTAGTGCTTATACTGTGGATAATAGTGGAGGTGCAATGTTGGATGAGTCCACTGGAAATGTTTCCTTGGTTTTTGATTATGGGGCTGGTCATGTTCATCCGGAGAAGGCCATGAACCCTGGCCTGATTTATGACATTTCTACTTATGATTATATGGATTTCTTGTGCAATTCAAATTATACCGCTAAGAACATCAAAGTGATCACAAGAAAGGGTGCAGATTGCAGTGGGGCAAAGAAGGCAGGTCATGCTGGGAATTTGAATTACCCATCTTTATCTGCAGTGTTTCAACAATATGACTTCATTAGAAGTGTGACTAATGTTGGAGACCCAAGCTCAGTCTACAAAGTCACTATTAGACCGCCTACAGGGGTGGTGGTCACTGTGGAGCCAGAGACGCTATCTTTCAGGAGGTTGGGTCAGAAGTTGAACTTCCTTGTTAGGGTGCAAACGAGGGCAGTTAAGCTTTCCCCTGGAAGCTCTAGTGTGAAGAGTGGTTCCATAGTTTGGTCTGATGGCAAGCACACTGTCACAAGTCCATTGGTTGTGACAATGCAGCAGCCTCTCTAA | 2253 | 0.5255 | MVTATATASAEKKTFIVQVQHEAKPSIFPTHRHWYQSSLASTTDPNSISNSNPIIHTYQTVFHGFSAKLSPLEAHKLQSLPHIIALIPEQVRHLHTTRSPQFLGLSTADRAGLLKETDFGSDLVIGVIDTGIWPERQSFNDRDLGPVPPKWKGQCVAGKDFPATSCNRKIIGARYFCAGYEATNGKMNESLEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYAKGMAAGMAPKARLAVYKVCWNAGCYDSDILAAFDAAVADGVDVASLSVGGVVVPYHLDVIAVGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWMTTVGAGTIDRDFPADVKLGNGKIIGGVSVYGGPGLTPGRLYPIVHAGSESGGDGYSSSLCLEGSLDPKFVRGKIVVCDRGINSRAVKGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGASGGDEIRKYISAASQSHSPPTATIIFKGTRLGIRPAPKVAAFSARGPNPESPEILKPDVIAPGLNILAAWVPSDERRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTSAYTVDNSGGAMLDESTGNVSLVFDYGAGHVHPEKAMNPGLIYDISTYDYMDFLCNSNYTAKNIKVITRKGADCSGAKKAGHAGNLNYPSLSAVFQQYDFIRSVTNVGDPSSVYKVTIRPPTGVVVTVEPETLSFRRLGQKLNFLVRVQTRAVKLSPGSSSVKSGSIVWSDGKHTVTSPLVVTMQQPL. | 751 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca1g06135 | 750 | Gene3D | - | 616 | 747 | - | - | |
| Seca1g06135 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 47 | 744 | IPR045051 | - | |
| Seca1g06135 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 529 | 539 | IPR023828 | - | |
| Seca1g06135 | 750 | Gene3D | Peptidase S8/S53 domain | 122 | 612 | IPR036852 | GO:0004252|GO:0006508 | |
| Seca1g06135 | 750 | CDD | Peptidases_S8_3 | 93 | 565 | IPR034197 | - | |
| Seca1g06135 | 750 | Pfam | Subtilase family | 120 | 580 | IPR000209 | GO:0006508|GO:0008236 | |
| Seca1g06135 | 750 | Pfam | PA domain | 372 | 449 | IPR003137 | - | |
| Seca1g06135 | 750 | SUPERFAMILY | Subtilisin-like | 94 | 603 | IPR036852 | GO:0004252|GO:0006508 | |
| Seca1g06135 | 750 | CDD | PA_subtilisin_like | 334 | 468 | - | - | |
| Seca1g06135 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 120 | 139 | IPR015500 | - | |
| Seca1g06135 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 528 | 544 | IPR015500 | - | |
| Seca1g06135 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 198 | 211 | IPR015500 | - | |
| Seca1g06135 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 122 | 338 | - | - | |
| Seca1g06135 | 750 | FunFam | p69E protein-like | 616 | 747 | - | - | |
| Seca1g06135 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 99 | 599 | - | - | |
| Seca1g06135 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 2 | 95 | IPR037045 | - | |
| Seca1g06135 | 750 | FunFam | Subtilisin-like protease SBT1.9 | 3 | 95 | - | - | |
| Seca1g06135 | 750 | Pfam | Fibronectin type-III domain | 647 | 744 | IPR041469 | - | |
| Seca1g06135 | 750 | FunFam | subtilisin-like protease SBT1.5 | 328 | 475 | - | - | |
| Seca1g06135 | 750 | Pfam | Peptidase inhibitor I9 | 14 | 95 | IPR010259 | - | |
| Seca1g06135 | 750 | Gene3D | - | 328 | 476 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca1g06135 | Seca-Chr1 | 164626300 | 164628597 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca1g06135 | 14 | 750 | Subtilisin-like Serine Gene Family | AT3G14240 | 77.219 | 0.0 | 1186 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca1g06135 | - | - | gmx:100784180 | 1221.45 |