Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g06063 ATGTTGGGCAAAAGTTTTAGTTTCAAACAAGTTCACCTAACATATCATCACCACCATGGAAGGCAAGTGGTGACCAGTACCAAAGATGTTATAATACCAAAAGGGTTCATGGCAATCAAGGTGGGTCAAGGCGAAGAGCAACAGAGGATCACGGTACCCGTTAATTACCTCAACCACCCCCTGTTTATTCAGCTCCTCAAGGAGGCAGAGGAAGAGTATGGTTTTTCTCACCAGGGAACCATAGTTATCCCTTGTCAAGTCGCCGAGTTCAAGAACGTTCAACACTTGATTGATACTGATCAGATGTCCCACCACCATCTAGTTGGCTGCTTCAGGGCTTGA 342 0.4561 MLGKSFSFKQVHLTYHHHHGRQVVTSTKDVIIPKGFMAIKVGQGEEQQRITVPVNYLNHPLFIQLLKEAEEEYGFSHQGTIVIPCQVAEFKNVQHLIDTDQMSHHHLVGCFRA. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g06063 113 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 92 IPR003676 GO:0009733
Seca1g06063 113 Pfam Auxin responsive protein 25 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g06063 Seca-Chr1 163968644 163968985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g06063 21 108 Calmodulin-binding Proteins AT4G31320 38.636 2.93e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g06063 K14488 - gmx:100500512 147.132