Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g06059 ATGGCTTCAGATTCCAAAACGTTTACATTTGAGGAGGTGTCCAAACACAACAACAAAAAGGATTGCTGGATTATTATCCATGGAAAGGTTTATGATGTCACCCCGTTTTTGCATGATCATCCAGGAGGTGACGAATCTTTATTGTCATCAACAGAGAAGGATGCCACCGTTGATTTTGAAGATGTTGGCCACAGTGACTCTGCTATAGAAATGATGGAAAAATACTTTGTTGGGAATGTTGACAGCTCCACTCTTCCATCTAAAGCTAACCACATCCCGCCACCACTCACACGTGGCGATAGCAATCAATCTTCAGGATTTGTTGCAAAGACTTTGCAATTCCTGTTGCCATTGTTGATATTGGCCTTTGCATTTGCTCTGCAGCACTATGGCAAAAAGAAACAGGTCAGCGATTCATGA 420 0.4214 MASDSKTFTFEEVSKHNNKKDCWIIIHGKVYDVTPFLHDHPGGDESLLSSTEKDATVDFEDVGHSDSAIEMMEKYFVGNVDSSTLPSKANHIPPPLTRGDSNQSSGFVAKTLQFLLPLLILAFAFALQHYGKKKQVSDS. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g06059 139 FunFam Cytochrome b5 type B 2 85 - -
Seca1g06059 139 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Seca1g06059 139 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Seca1g06059 139 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Seca1g06059 139 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Seca1g06059 139 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Seca1g06059 139 PANTHER CYTOCHROME B5 3 132 - -
Seca1g06059 139 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Seca1g06059 139 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Seca1g06059 139 SMART Cyt_b5_2 8 81 IPR001199 -
Seca1g06059 139 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Seca1g06059 139 Gene3D - 2 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g06059 Seca-Chr1 163930153 163931310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g06059 1 133 NADPH P450 reductases AT5G53560 59.398 1.79e-58 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g06059 K23490 - gmx:100788796 196.438