Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g06053 ATGGATACACTGTCCACCTCTGTTTCAACCCTCAAAATCCCACCAACAAATCGTGAACTCTATCACTTTACAAGATCTCCCTATGCAACCCCAACTCGTCCTCCACAACCACAACCACAACCCCACGTCTCCTCCACTTCCATACCCAACCTGCTCCCCAAGACCAACACTTTTTCACACAACAAGCGTTCTTCTTCTTCTCTATCATTCTCCTCCTCAAACACCACATCCCCACCTCTCAAACTCAAACCATCTTCTTCAATATTCCATCAAAAGCCTGCTACTGGTTATGCAGCAGCTGTCATAGATGTGGCTAAAAACACCAATTCCCTTCACTTGGTTCAAAAGGATGCTCAGAGGCTCTTGAAATTCCTCAAAAATCTGAACTTTCAATCATCTGTGGATGACCCTTCAATGGTTGAGGAGGTTAAAGGACAAGCCTTGAGAAAGGTGATAGAGCAGGGAAGTTTTCATAGGCATCTGGCTGTTATGTTGAAGATGCTGGTGAAGAAGAACAAGGTGGGAATTGTGCATGAAGTGTTGGAAGAGTTCGAGAGGATTTATGATGAGCTTTGTGGAACTCAAGTGGTATTGGTTTCGTCTACAACAAAGATGGGGGAAGAACAACTTTTTGGGATTGCTAAGGGCGTGCACCGAGTAAGTGGGGCTTTCAGGGTGAAGGTAAAGAATTTGGTTCAAGAGAGCTTGCCTTCTTTTGCAGTGTGA 726 0.4477 MDTLSTSVSTLKIPPTNRELYHFTRSPYATPTRPPQPQPQPHVSSTSIPNLLPKTNTFSHNKRSSSSLSFSSSNTTSPPLKLKPSSSIFHQKPATGYAAAVIDVAKNTNSLHLVQKDAQRLLKFLKNLNFQSSVDDPSMVEEVKGQALRKVIEQGSFHRHLAVMLKMLVKKNKVGIVHEVLEEFERIYDELCGTQVVLVSSTTKMGEEQLFGIAKGVHRVSGAFRVKVKNLVQESLPSFAV. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g06053 241 MobiDBLite consensus disorder prediction 26 87 - -
Seca1g06053 241 MobiDBLite consensus disorder prediction 1 20 - -
Seca1g06053 241 PANTHER ATP SYNTHASE DELTA CHAIN 69 237 IPR000711 GO:0015986|GO:0046933
Seca1g06053 241 Pfam ATP synthase delta (OSCP) subunit 95 236 IPR000711 GO:0015986|GO:0046933
Seca1g06053 241 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 94 191 IPR026015 -
Seca1g06053 241 Gene3D - 94 185 IPR026015 -
Seca1g06053 241 MobiDBLite consensus disorder prediction 43 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g06053 Seca-Chr1 163878665 163879390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g06053 94 236 Primary Pumps ATPases AT4G09650 34.247 2.31e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g06053 K02113 - gmx:100526851 248.054