Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g05941 | ATGTGTGAAGAAGCTCTGAGGAAGAAACAATACCAAGTGTTGGAGGAAGTGGGGCGTGGCAGATTCGGCACTGTGTTCCGTTGCTTCCACCCAATTTCAAACCAATTCTATGCTTGCAAAGTCATCGACAAGACCCTCCTCACCGATTCCATTGATCGTCAATGCCTAGAAAACGAGTCCAAATTCATCACCTATCTCTCTCCACATCCCAATATTCTTCAAACCTTCGACGCCTTCGAAGACGCAGATTTCTCTACCATCGTCTTCGACCTCTGTGACCCTCTCACCCTCTTTGACCGCATCGCCGATCGTCCCTTGCCGGAGCCACAATCCGCTTCCATCATGAAGCAGCTTCTAGAAGCTCTTGCACATTGCCACAGGCTCGGAATAGCGCACAGAGACATAAAGCCTGATAACCTGTTGTTTGATTCGAGGGATAACCTTAAAGTCGCCGACTTTGGTTCGGCGGAGTGGTTCGGCGACGGAAGGAGCATGAGTGGGGTGGTGGGTACGCCGTATTATGTGGCGCCGGAGGTTTTGATGGGGAGAGAGTATAATGAGAAAGTGGATGTTTGGAGTAGTGGTGTGATTCTTTACACAATGTTGGCTGGGATTCCACCTTTTTATGGAGACTCTGCTGCAGATACTTTTGAGGCTGTGGTGAGGGCTAATCTCAGGTTTCCAACAAGGATTTTCAGGTCTGTGTCTTCCTCTGCTAAGGATCTCATCAGGAAGATGATTTGTAGGGATCCCTCTAGGAGAATATCAGCAGAGCAAGCCTTGAGACACCCATGGATATTGAGTGGTGGTGTGACTAGTGATCTAAATTGA | 831 | 0.4862 | MCEEALRKKQYQVLEEVGRGRFGTVFRCFHPISNQFYACKVIDKTLLTDSIDRQCLENESKFITYLSPHPNILQTFDAFEDADFSTIVFDLCDPLTLFDRIADRPLPEPQSASIMKQLLEALAHCHRLGIAHRDIKPDNLLFDSRDNLKVADFGSAEWFGDGRSMSGVVGTPYYVAPEVLMGREYNEKVDVWSSGVILYTMLAGIPPFYGDSAADTFEAVVRANLRFPTRIFRSVSSSAKDLIRKMICRDPSRRISAEQALRHPWILSGGVTSDLN. | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g05941 | 276 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672|GO:0006468 | |
Seca1g05941 | 276 | ProSiteProfiles | Protein kinase domain profile. | 11 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g05941 | 276 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 268 | IPR011009 | - | |
Seca1g05941 | 276 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 92 | - | - | |
Seca1g05941 | 276 | FunFam | Phosphoenolpyruvate carboxylase kinase 2 | 3 | 276 | - | - | |
Seca1g05941 | 276 | SMART | serkin_6 | 11 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g05941 | 276 | ProSitePatterns | Protein kinases ATP-binding region signature. | 17 | 40 | IPR017441 | GO:0005524 | |
Seca1g05941 | 276 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 6 | 268 | - | - | |
Seca1g05941 | 276 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 274 | - | - | |
Seca1g05941 | 276 | CDD | STKc_CAMK | 10 | 265 | - | - | |
Seca1g05941 | 276 | Pfam | Protein kinase domain | 11 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g05941 | Seca-Chr1 | 162790170 | 162791476 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g05941 | 11 | 274 | EF-hand Containing Proteins | AT1G50700 | 39.552 | 2.17e-72 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Seca1g05941 | Pkinase | 1.2e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g05941 | - | K08794 | gmx:548089 | 439.113 |