Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05935 ATGGTGAATACGTGGGCCATAACGCATGATGAGAAGGTGTGGGTAGAGACAAGGGAGTTCAAGCCTGAGAGGTTCATGAAAGTGGATGTGAACATAATGGGATCTGATTTGAGGTTGGCTCCTTTTGGGTCTAGAAGAAGGGTCTGTCCTGAGAAGAACATGGGCTTAGCCTCTATTCACCTCTGGCTTGCACAATTGCTTCAAAGCTTCAAATGGGTTCCCTCTGAGGATGCCCCTGTTGAAAGGAATCAAGCATGTGGTCAGGGTGCAGCGGAATAA 279 0.4803 MVNTWAITHDEKVWVETREFKPERFMKVDVNIMGSDLRLAPFGSRRRVCPEKNMGLASIHLWLAQLLQSFKWVPSEDAPVERNQACGQGAAE. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05935 92 SUPERFAMILY Cytochrome P450 1 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g05935 92 PRINTS E-class P450 group I signature 3 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g05935 92 PRINTS E-class P450 group I signature 49 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g05935 92 PRINTS E-class P450 group I signature 39 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g05935 92 PANTHER CYTOCHROME P450 78A7-RELATED 1 81 - -
Seca1g05935 92 Pfam Cytochrome P450 1 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g05935 92 Gene3D Cytochrome P450 1 88 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05935 Seca-Chr1 162724141 162724419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05935 1 73 Cytochrome P450 AT1G13710 65.753 8.49e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05935 K20619 - vvi:100249034 135.576