Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05924 ATGAACAATAATGCTCAGAAAAGAAAGCATACTTTGGATTTTGGTTGCAGGAGTAAGGGAATCACTGAAGCATTACGGTTGCAGATGGAACTCCAGAAACGGCTTCACGAACAACTTGAGATTCAAAGGAAGTTGCAGATTCAAATTGAAGACCAAGGGAAACGTCTTCAGGTGATGTTTGAGAAACAGAGAGAGATGGGAGACAGCAAGGTCAAGGGCTCATCCTCCTCTATGGACGCGCCTTCTACCGCACCATCAGACACAGTGCTACCTTCTTCACCAGTAGACAAATTAGAAACCTCAAATGAGGAACATGACAAATTAGGAAGCAACAGCAGCATTCCAAAAGCCATGCCTGAAGGAAGTTCCCAGGATGCAAGCACAAAGCAAATGGTAGCTGAAGCTGAAGTTATCAATGAACAAGAGACCATAGATGATCAGTTTGCTGCACCACCCACAAAACGGATGAAGAGTTGA 477 0.4423 MNNNAQKRKHTLDFGCRSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQVMFEKQREMGDSKVKGSSSSMDAPSTAPSDTVLPSSPVDKLETSNEEHDKLGSNSSIPKAMPEGSSQDASTKQMVAEAEVINEQETIDDQFAAPPTKRMKS. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05924 158 MobiDBLite consensus disorder prediction 60 158 - -
Seca1g05924 158 Pfam MYB-CC type transfactor, LHEQLE motif 21 65 IPR025756 -
Seca1g05924 158 MobiDBLite consensus disorder prediction 115 130 - -
Seca1g05924 158 Coils Coil 22 42 - -
Seca1g05924 158 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 19 131 IPR044848 GO:0003700
Seca1g05924 158 MobiDBLite consensus disorder prediction 70 97 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05924 20 80 G2-like Transcription Factor Family AT4G28610 65.574 4.41e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05924 - - mtr:25499705 176.792