Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05916 ATGCATCTAGCTGATGCATCTTCTAATCCAAATCCCTGTGATTATACTTGTAGTTCTCTTGTCAATTTTCATACTCCGCTGATGGAAATTTGGGTTACAGACATGGTCACGTCAATTCACGAGAATTGGTTTAGTGCAAGGTGCATAAACACATCCAAGCCTGGTGGTGAAGGTGCAATTGTCATGCAAACAGCAGCATATATCTTGGTTGCTCTGTATGAAGGTTCCATTGGTCCGGCATCTCGTGCTATGGCAGCTGCTGATCAGTTAACTTGGCAGTTAGGAAGAAAAAATCTTTAG 300 0.4233 MHLADASSNPNPCDYTCSSLVNFHTPLMEIWVTDMVTSIHENWFSARCINTSKPGGEGAIVMQTAAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05916 99 PANTHER OS05G0241400 PROTEIN 35 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05916 Seca-Chr1 162566601 162567829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05916 35 99 Carbohydrate Esterase AT4G19410 75.385 3.02e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05916 - K19882 gmx:100811973 128.642