Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca1g05913 | ATGACAAAGTTGTCCTATTTGCATGAGCCTGGAGTCTTGCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAAACTACCTCATATTTATGATGCACACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTAATGAAACAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAATACCTTGCTTTCTTAGGTGGTAGGGTTGCCACTGAAGGACGAACAGTTGAACAACAAGTTCTTGAATCAAACCCAGTTTTGGAAGCATTTGGTAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGGCATCCTAAAACATTTCATTACCTTAACCAGTCAAAATGCTTTGAACTGGCTGATATAAGTGATTCTCGTGAGTATCTTGCCACTAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTTCGATTCTTCATCTTGGTAATATTGAGTTTGCTAAAGGAAAGGAAGTTGATTCATCAGTTCCAAAAGATGATAAATCCAAATTCCACTTAAAAACAACTGCTGAGCTCCTTATGTGTGACGTTGGTGGCTTGGAAGATGCATTATGCAAGCGTGTCATGATCACCCCTGAGGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAACAGTCAGCAGAGATGGCTTAGCAAAAACAATTTATTCTAGGCTGTTTGACTGGTTGGTGGACAAGATTAATAATTCAATCGGACAAGACTCCAATTCTAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACGAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCTAAGTCAACACATGAAACATTTTCAAACAAACTTTATCAAACATTTAAGAATCACAAGCGCTTTATAAAGCCAAAATTGTCTCGAACAGATTTCACCATTTCTCATTATGCTGGCGAGGTGCTGTACCAGTCTGACCAATTTTTAGATAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTGCTTCGAAATGCCCTTTTGTAGTAGGCCTTTTTCCTCCACTTCCAGAAGAGACATCAAAATCTTCAAAATTTTCTTCAATTGGGTCTCGTTTTAAGCTGCAACTACAACAGCTAATGGAAACACTAAACTCAACCGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAGTTTTTGAGAATGTCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGGTACCCTACTCGCCGTGCTTTCTTTGAGTTTATAAACCGTTTTTCCCTCCTTGCCCCAGAGGTCACAGAAGCAAACCATGATGAGAAGACTGTTTGCCAAAAGATTTTAGAAAAGATGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGAGCAGGTCAGATGGCTGAACTAGACGCAAGGAGAGCTCAAGTACTAAGTAATGCAGCAAAAACTATCCAACGGCGTATACGAACCCATCAAGCTCGTAAATATTATCTTGCATTACGAATGAAGACGATATACGTGCAGTCTCTGTGGAGAGGAAGACTTGCATGCAAACTTTATCATCACCTGAGAAGAGAGGCTGCTGCTGTGAAAATTCAGAAGAATGCACGTAGATATGAAGCTAGGAAAGCGTATACTAAACTCCAAGCATCAGTACTTACTTTGCAAACAGCTTTGAGGGCAATTGCTGCCCTTAAGGAGTACAGTTTCAGGAGACGGACTAAAGCTTCCGTCATAATTCAGGCTCGGTGGCGGTGCCACAAAGCTTCCTCGTATTATAAGAGGCTGAGGAAAGGTGCAATAGTGACCCAATGCCGATGGAGGGGGCGTTTGGGCAGGAAAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGCGCACTTAAAGAAGCAAAGGACAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAGAGTTTAAGGACCAACCTAGAAGAATCCAAAGCACAAGAGATAGCAAAACTGCAGAATTCACTGCAGGAGATGCAGGGAAAAGTTGATGAAGCCAATGCTGTGCTTGTAAAGGAGCGAGAGAATGCAAAGAAAGCTGTTGAAGAAACACCTCCTGTTATTAAAGAAACTCAGGTTATTGTTGAAGACACACAGAAGATTGAATCACTAACAGCGGAAGTTGAGAACCTAAAGACTTCACTAGAGTCTGAGAAAGAAAAAGCTGATGATTTTGAAAGGAAATATAATGAAGTCCAAGCTTCAAGTGAAGAAAGGGGTAAAAAATTAGAAGATACAGAGAAGAAGGTCCGTCAGCTCCAAGAATCGTTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAATCAGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTCTCAGGACGCTCCAGATCAATTATTCAGAGAGCTGACAGTGGACATATTGCAGTGGAAGCAAAACCACATTTGGATATGCATAGCCCATCAATGAACCACAGGGAATCGTCTGAAGTGGAGGATAAACCACAGAGGTCATTGAATGAGAAACAACAGGAGAACCAAGAGTTGCTCATTAGATGTATAGCACAACATCTAGGCTTTGCTGGCAATAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACTAGCGTTTTTGATCGTATAATCCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCTTCTACACTTCTCTTGTTGCTCCAGCGAACACTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCTCAACGCCGTCGTTCTTCCTCAGCAACCCTGTTTGGGAGAATGACACAAAGTTTCCGTGGAGCTCCAGCAGGAGTCAATCTTTCCCTAATAAATGGTAGCATGAGTGGTGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCACTGCTTTTCAAACAGCAGCTTACAGCTTATGTTGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATATCTCCCTTGCTCGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAAGGATCATCACGTTCAGTTGCAACCACTGAAGCCCAGAAAGCTCTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTGGGAACTTCTTAAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCTTTCATCAATGTCCAACTATTCAATAGTCTTCTTTTAAGAAGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTGAAAGCTGGTTTGGCTGAACTGGAGCATTGGTGTTACAAGGCAACAGATGAGTATGCAGGTTCCGCCTGGGATGAGCTCAAACATATTAGACAGGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACGCTAGATGAAATAAGTCATGACCTATGCCCAGTCCTCAGTATACAACAGCTATATCGAATTAGTACCATGTACTGGGATGACAAGTACGGCACACATAGCGTATCCCCTGATAAAAACTATGTTGAGCTTTGCCGTATCAATGTTTTCATCTAG | 4227 | 0.4057 | MTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQKLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMINETKSNSILVSGESGAGKTETTKMLMQYLAFLGGRVATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGHPKTFHYLNQSKCFELADISDSREYLATRRAMDIVGISQKEQEAIFRVVASILHLGNIEFAKGKEVDSSVPKDDKSKFHLKTTAELLMCDVGGLEDALCKRVMITPEEVIKRSLDPQSATVSRDGLAKTIYSRLFDWLVDKINNSIGQDSNSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTISHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVVGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEVTEANHDEKTVCQKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKTIQRRIRTHQARKYYLALRMKTIYVQSLWRGRLACKLYHHLRREAAAVKIQKNARRYEARKAYTKLQASVLTLQTALRAIAALKEYSFRRRTKASVIIQARWRCHKASSYYKRLRKGAIVTQCRWRGRLGRKELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEIAKLQNSLQEMQGKVDEANAVLVKERENAKKAVEETPPVIKETQVIVEDTQKIESLTAEVENLKTSLESEKEKADDFERKYNEVQASSEERGKKLEDTEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRADSGHIAVEAKPHLDMHSPSMNHRESSEVEDKPQRSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPAGVNLSLINGSMSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVATTEAQKALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDKNYVELCRINVFI. | 1409 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca1g05913 | 1408 | PANTHER | MYOSIN | 1 | 1394 | - | - | |
| Seca1g05913 | 1408 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 246 | 535 | - | - | |
| Seca1g05913 | 1408 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 719 | IPR027417 | - | |
| Seca1g05913 | 1408 | FunFam | unconventional myosin-Va | 671 | 719 | - | - | |
| Seca1g05913 | 1408 | Gene3D | - | 186 | 244 | - | - | |
| Seca1g05913 | 1408 | Gene3D | Kinesin motor domain | 1 | 596 | IPR036961 | - | |
| Seca1g05913 | 1408 | ProSiteProfiles | Dilute domain profile. | 1093 | 1406 | IPR002710 | - | |
| Seca1g05913 | 1408 | FunFam | Class V myosin | 373 | 510 | - | - | |
| Seca1g05913 | 1408 | CDD | MYSc_Myo11 | 10 | 654 | IPR036018 | - | |
| Seca1g05913 | 1408 | Pfam | IQ calmodulin-binding motif | 789 | 809 | IPR000048 | GO:0005515 |
Showing 1 to 10 of 49 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca1g05913 | K10357 | - | gmx:100816792 | 2512.64 |
Showing 1 to 1 of 1 entries