Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05854 ATGATGTACATCATCAATTCACGTGCCAGGTTTAACCCTCAATTACCTGTTGGTTATTATGGAAACGATTTTGTGTTCCCTGCGACGGTCACAACTGTCGGAAAACTATGTGGAAACTCATTTGGCTATGCGGTGGAGTTAATAAGGAAAGTAAAAGTTGAGGTCACCGAGGAGTATGTGCATTTCGTGGCAGATTTTATGGTATTGAAGGGACGATGTTTATTTACAACGGTGAGATCTTGCATTGTGTATGCTTTGACACGTGATAGATTCAGAGAAGTGGACTTTGGGTGGGGCAATGTAATATATGGTGGCGTGGCCAAAGGTGGGGCCGACCCTGGAGCAACCTATCTCATACGGTCTAAGAATGCAAAGGGAGAATGTAATGCCAATTTGCTTGCTCATCGAGGTTATGAAGAGGTTTGCTAA 429 0.4359 MMYIINSRARFNPQLPVGYYGNDFVFPATVTTVGKLCGNSFGYAVELIRKVKVEVTEEYVHFVADFMVLKGRCLFTTVRSCIVYALTRDRFREVDFGWGNVIYGGVAKGGADPGATYLIRSKNAKGECNANLLAHRGYEEVC. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05854 142 Gene3D - 1 137 IPR023213 -
Seca1g05854 142 Pfam Transferase family 1 126 - -
Seca1g05854 142 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05854 Seca-Chr1 161891216 161891644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05854 2 105 Monolignol Biosynthesis Gene Families AT5G48930 30.702 2.00e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05854 - K19861 aprc:113862049 186.037