Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05789 ATGACGTGTTTCTCTGCAGATCAAATAATTGAAATGCTCACTGAACAATTTAATCGATTCGTCATTCACTGCAATTTGAAGACACCATCAGATAATGCATCAGTGCAATTGAATGAGACTTCTAAAGACATGGATGAGAATAGTATGTCCAATGGAATCCATGAACTTTCTCCTGATCAGGGTCATACACTCCCAATATTAAAGAAAATCCTTGACTTGAGTACCAAAGTTCAGAATTTGAAGAAACAACATGTAGCCTTATCTAATCAAGTGAAACTCACAACTGAGTCATTTCCAGACCTAGATGTTTTGAAGTCTGTTCAGCTTCTGGGTGCTGAATATGAACTATTGAAAAGAAAGTACCTGGAGGAGTCCTTTGAGCGTAGGAGGCTTTACAATGAAGTGATTGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGGCCATTAAATGAAAGTGAAATTGCAAATGGATCAACAGTCAATTTCGAGTCATCAGCCGAGGAGCTTCAAGTCATTTGCCCTGACTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTCAGACCTGACGATAACCAAGAGGCTGTTTTTGCACAAACAAAACCTATTGTTACATCAGTATTAGATGGATTTAATGTTTGCATTTTTGCATATGGCCAAACTGGAACTGGCAAGACTTTTACCATGGAGGGAACCCCAGAGCATAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGGATATCTGAAGAGAGACAAGGCATCGTAAAATATGAATTGCTTGTTAGCATGTTGGAGGTTTACAACGAGAAAATAAGGGATCTCTTGGCGGAAAATTCTACAGAACCTACCAAGAAGTTGGAGATAAAGCAATCTGCAGATGGAACCCAAGAAGTCCCAGGTCTGGTTGAAGCTCGTGTTTATGGAACAGAGGATGTTTGGGAAATGTTGAAGTCTGGGAACCGAGTCAGATCTGTTGGATCCACTAGTGCTAATCAGCTTAGCAGTCGTTCTCATTGTTTGTTGAGAGTAACTGTTATCGGGGAGAATTTGATCAATGGCCAGAGAACAAGGAGTCACCTATGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTGGGGAAAACTGAAGCTGAAGGAGAAAGGCTGAAGGAATCTCAGTTCATAAATAAGTCTTTATCAGCACTTGGTGATGTTATTTCAGCTCTTGCGTCCAAATCAGCCCATATACCTTACAGGAACTCGAAGCTCACTCATATACTCCAGAGCTCTTTAGGTGAGGATTCATTTCAGCACTATGCTCCCTTGGGGATGACTCCTCCAAGATTTGATTTACATCTAAATCTTGGTGCTTTATATCTGATAATACAATCTAATTGTGGAGATTGCAAAACTCTAATGTTTGTCCAGATAAGTCCAAGTAAAGCAGACTTGACAGAGACACTTTGTTCACTGAATTTTGCCACGCGTGTTAGAGGAATTGAGAGTGGCCCAGCCCGCAAGCAAGCTGACCTCACTGAGCTGTTTAAGTACAAGCAAATGGCAGAAAAGCTCAAACACGATGAGAAGGAAACTAAGAAATTACAAGATAACTTGCAGACAGTGCAAATGAGACTAGCTGCAAGAGAAATAATGTGCCGAAATCTTCAAGAAAAGGTTCGGGACCTTGAGAACCAGATAGCAGAGGAGAGAAAAATCAGACTAAAACAAGAAAGTAGGTCACTTGCCGCTGTTTCAGCTCAACCTTCAACAGTGTCATCATCAAAACACACAACAGTCGAGAAAGCCATAAATAAGCCACCACTGAATCCTTCAAAAAGGCCTCCACTTAGAAGAATTACTAATACTAATTTCTTGCCACCACCATCTGAGAGAAGGCCCTCATGCAGCTCTTCCATGGATGGAAAGGAAAACACTGGCAGAACAACCTCAAGGACAGAAGGCCTAGCGAAATCAAGAAGAAGGGGAACAATTGCTATGAGACCACCACCTGCACCATCAAAAACACAGGTCCTTCAGCCTAGAAGACGAGTTTCCATAGCTACGTTCCATTCTGACACAACTTCTGACATGCCAACACAGGTTCTTCAACCTAGAAGGCGAGTTTCCATAGCTACACTACGTTCTGACACAGCTTCTGACATGGAAACTCCTCTACGTACCTCTACCTCTCAATCCACTGATGGAAGCATTGTTCAGCAATCAATGAGGAACCAAAGGAAAGCAAGGTATTCAAGGTTGTTCACCCCAATGCCAACAACATCAGTTGAGACATCATCGCCAACTGTGATGAGAAGCAGCAGTAAATTTGCGGGCAGTCCAACACAGGCAGATTCACGAATGGCTACTAGGCATCCAACTGTCCTTGCACTGCAACGCAAATCTTTAATATGGAGTCCTCTCAAGCTAAAAGGCCTCAAGAATAGTACCAGAAGGTCATTATCACTCTTGCCATCTCGGCCTTCCACTTTCACCGAAATGCAATGA 2493 0.4208 MTCFSADQIIEMLTEQFNRFVIHCNLKTPSDNASVQLNETSKDMDENSMSNGIHELSPDQGHTLPILKKILDLSTKVQNLKKQHVALSNQVKLTTESFPDLDVLKSVQLLGAEYELLKRKYLEESFERRRLYNEVIELKGNIRVFCRCRPLNESEIANGSTVNFESSAEELQVICPDSSKKQFKFDHVFRPDDNQEAVFAQTKPIVTSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRISEERQGIVKYELLVSMLEVYNEKIRDLLAENSTEPTKKLEIKQSADGTQEVPGLVEARVYGTEDVWEMLKSGNRVRSVGSTSANQLSSRSHCLLRVTVIGENLINGQRTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGEDSFQHYAPLGMTPPRFDLHLNLGALYLIIQSNCGDCKTLMFVQISPSKADLTETLCSLNFATRVRGIESGPARKQADLTELFKYKQMAEKLKHDEKETKKLQDNLQTVQMRLAAREIMCRNLQEKVRDLENQIAEERKIRLKQESRSLAAVSAQPSTVSSSKHTTVEKAINKPPLNPSKRPPLRRITNTNFLPPPSERRPSCSSSMDGKENTGRTTSRTEGLAKSRRRGTIAMRPPPAPSKTQVLQPRRRVSIATFHSDTTSDMPTQVLQPRRRVSIATLRSDTASDMETPLRTSTSQSTDGSIVQQSMRNQRKARYSRLFTPMPTTSVETSSPTVMRSSSKFAGSPTQADSRMATRHPTVLALQRKSLIWSPLKLKGLKNSTRRSLSLLPSRPSTFTEMQ. 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05789 830 ProSitePatterns Kinesin motor domain signature. 362 373 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca1g05789 830 MobiDBLite consensus disorder prediction 708 783 - -
Seca1g05789 830 ProSiteProfiles Kinesin motor domain profile. 141 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05789 830 SMART kinesin_4 139 504 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05789 830 MobiDBLite consensus disorder prediction 574 676 - -
Seca1g05789 830 PRINTS Kinesin heavy chain signature 332 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05789 830 PRINTS Kinesin heavy chain signature 212 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05789 830 PRINTS Kinesin heavy chain signature 363 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05789 830 PRINTS Kinesin heavy chain signature 412 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05789 830 Pfam Kinesin motor domain 147 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05789 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 496 IPR027417 -
Seca1g05789 830 Gene3D Kinesin motor domain 136 539 IPR036961 -
Seca1g05789 830 Coils Coil 513 575 - -
Seca1g05789 830 MobiDBLite consensus disorder prediction 576 596 - -
Seca1g05789 830 Coils Coil 70 90 - -
Seca1g05789 830 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 638 IPR027640 GO:0003777|GO:0007018
Seca1g05789 830 MobiDBLite consensus disorder prediction 611 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05789 Seca-Chr1 161239491 161243995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05789 107 502 Calmodulin-binding Proteins AT5G65930 39.447 1.93e-72 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05789 K10406 - gmx:100808603 1055.43