Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca1g05728 | ATGGCATTTGTTAATTTCCTTTTCATTCTCCTGCTTTTACCCTCCTCATTTGAGGCTTTCTCAGATGAAATTCCCTCTGATATCCAAACCCAAGACATGCATGCCTTGATTGCACAAGCCTGCATGGACATTGAGAACCAAAACACATGCCTCACAAACATTCAAAATGAGCTCACCAAAATTGGCCCACCAAGCCCCACTTCAGTCATAAGTGCTGCACTCAGGACCACACTCAATGAAGCCCAAAGTGCAATTAACAACATAACAAGATTCAGCACATTCTCTGTCAGTAACAGGGAACAAATAGCCATAGAAGATTGCAAGGAGCTTCTTGATTTCTCTGTGTCTGAGCTGGCATGGTCATTAGGTGAAATGAGGAGAATCAGAGCAGGGGACAAAAGCGTGCAATATGAAGGAAACCTTGAAGCTTGGTTAAGTGCAGCTCTTAGCAACCAAGACACGTGTCTTGAAGGATTTGAAGGCACTGATAGACGCCTTGAGAGCTACATTAGTGGAAGCTTAACACAAGTCACACAGCTTATAAGCAATGTTCTGTCTCTATACACTCAATTGCATAACTTACCCTTCAGGCCTCCAAGGAACACCACCACTACTACTCTTGTAACAAGTGATGAAGAACAACAAAGCTTGGATTTGGAGTTTCCTGAATGGATGACAGAGGGTGATCAAGAGCTCCTTAAATCCAAGCCACGTGGCATTCGTGCAGATGCTGTTGTGGCATTGGATGGAAGTGGTCACTACAGAACAATCACAGATGCTGTTAATGCAGCTCCAAGTCATAGCATCAGGAGATATATTATATACGTGAAGAAAGGACTTTATAAGGAAAATGTAGATATGAAGAAGAAAATGACCAACATCATGCTCGTAGGTGATGGTATTGGCCAAACCATTATCACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACTCTTGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTTCGCAACACTGCTGGACCAGTGAATCATCAAGCTGTGGCACTGCGTGTGGATTCAGATCAATCTGCTTTCTATAGGTGCAGTGTGGAAGGGCACCAAGATACTCTTTATGCACACTCACTGAGACAATTTTACCGTGAGTGCGAAATTTATGGTACCATAGACTTTATTTTTGGCAATGGGGCTGCTGTGTTGCAAAATTGCAAGATATACACTAGAGTTCCACTTCCCTTGCAGAAGGTTACTATCACAGCCCAAGGAAGAAAAAGCCCACATCAGAGCACTGGGTTTACAATCCAGGATAGTTATGTTTTGGCTACCCAACCCACATATTTGGGGAGGCCGTGGAAGCAATACTCTAGAACAGTTTACATTAACACATACATGAGTGCAATGGTTCAACCACGAGGGTGGCTTGAGTGGCTTGGAAACTTTGCCTTGGACACATTGTGGTACGGTGAGTACAGGAATTATGGGCCTGGTTCATCTCTTGCGGGTAGGGTCAAATGGCCCGGTTATCATATCATGAAAGATGCTGGTACCGCTAGTTTCTTCACGGTTCAACGATTCATTAATGGTGACTCATGGTTGCCGGGAACAGGCGTCAAGTTCACATCAGGCAGTAGGAGACTGGCCCTAATAGGGGTCTCAACGTTCTTACTGGTGGCTATGGTGGTTGCCGTTACCGTTAGTGTTGGGATCAGCAAGAATGGTTCCGGCGATGATTCAAAGGATAAAAACAAATCCCACGTGGCATCATCCATGAAAGCCGTGAAAACCATTTGTGCACCCACAGATTACAAGAAGGAATGCGAGGAAAGTCTCACAGCACAGGCTGGTAACACAACCGACCCAAGAGAACTCATCAAAATCGCCTTCAGCGTAACCATCAAAAGAATCAGTGAGGGCCTCGAGAAAACCCAGTTAATGCACGAGGTTGAGAGCGACCCTCGAACCAAAGAGGCACTCGACACGTGTAAGCAACTCATGCACCTCTCCATCGAGGAATTCAAACGGTCACTCGAGAGATTCGGTAAATTCGATCTCAACAACCTCGACAATATCCTAACGAGTTTAAAGGTATGGCTCAGCGGTGCAATCACGTACCAAGAAACGTGCCTTGACGCGTTTGAGAACACAACAACCGAAGCTGGTCACAAGATGAAGGACGTTTTGCAAACTGCCATGCACATGAGCAGTAACGGTCTTGCTATCATCACCGAGCTGTCAAAAACTCTCGATGAGATGCATCTCACAAAGCCTGGGAGACGCCTCTTGAAGGAAGCTGAGGATTTGGAAGTGCTTGGTCACGATGACTTTGAGCTTGAGCTTCCTGAATGGGTTGATGATCGCGTCGGTGTTCGTAGGCTCCTACGCATGACCGCAAGGAAACTCAGTGCTCACGTGACTGTTGCCAAGGATGGAAGTGGAAATTTCACCACCATCAACGAGGCATTGAAGCACGTGCCAAAGAATAACCTAAAGCCATTCGTTATCTACCTCAAGGAAGGCGTTTACGATGAGTACGTTGAAATCGCCAGAAGCATGACTCACGTGGTTTTCGTTGGTGATGGTGGTAAAAAGTCACGCATCACGGGCAACAAAAACTTCATAGATGGCGTCGGTACCTACAGAACCGCCACCGTTGGTACGTATACATCTCAATTTTCATGTTGGTTTAAAGCTAAATTAAATAATCACATACACCATGTGATCAACGGTTAA | 2736 | 0.4543 | MAFVNFLFILLLLPSSFEAFSDEIPSDIQTQDMHALIAQACMDIENQNTCLTNIQNELTKIGPPSPTSVISAALRTTLNEAQSAINNITRFSTFSVSNREQIAIEDCKELLDFSVSELAWSLGEMRRIRAGDKSVQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHNLPFRPPRNTTTTTLVTSDEEQQSLDLEFPEWMTEGDQELLKSKPRGIRADAVVALDGSGHYRTITDAVNAAPSHSIRRYIIYVKKGLYKENVDMKKKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLATQPTYLGRPWKQYSRTVYINTYMSAMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHIMKDAGTASFFTVQRFINGDSWLPGTGVKFTSGSRRLALIGVSTFLLVAMVVAVTVSVGISKNGSGDDSKDKNKSHVASSMKAVKTICAPTDYKKECEESLTAQAGNTTDPRELIKIAFSVTIKRISEGLEKTQLMHEVESDPRTKEALDTCKQLMHLSIEEFKRSLERFGKFDLNNLDNILTSLKVWLSGAITYQETCLDAFENTTTEAGHKMKDVLQTAMHMSSNGLAIITELSKTLDEMHLTKPGRRLLKEAEDLEVLGHDDFELELPEWVDDRVGVRRLLRMTARKLSAHVTVAKDGSGNFTTINEALKHVPKNNLKPFVIYLKEGVYDEYVEIARSMTHVVFVGDGGKKSRITGNKNFIDGVGTYRTATVGTYTSQFSCWFKAKLNNHIHHVING. | 912 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca1g05728 | 911 | ProSitePatterns | Pectinesterase signature 2. | 387 | 396 | IPR033131 | - | |
| Seca1g05728 | 911 | SUPERFAMILY | Pectin lyase-like | 803 | 894 | IPR011050 | - | |
| Seca1g05728 | 911 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 33 | 192 | IPR035513 | - | |
| Seca1g05728 | 911 | Pfam | Plant invertase/pectin methylesterase inhibitor | 594 | 742 | IPR006501 | GO:0004857 | |
| Seca1g05728 | 911 | Pfam | Plant invertase/pectin methylesterase inhibitor | 36 | 187 | IPR006501 | GO:0004857 | |
| Seca1g05728 | 911 | CDD | PMEI-like_3 | 597 | 748 | - | - | |
| Seca1g05728 | 911 | PANTHER | PECTINESTERASE | 24 | 535 | - | - | |
| Seca1g05728 | 911 | CDD | PMEI-like_4 | 49 | 191 | - | - | |
| Seca1g05728 | 911 | Gene3D | - | 802 | 897 | IPR012334 | - | |
| Seca1g05728 | 911 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 36 | 192 | IPR035513 | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca1g05728 | K01051 | - | gmx:100810565 | 936.021 |
Showing 1 to 1 of 1 entries