Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05718 ATGGAAACAGAGCAAGTTTTGTCATTCTCTGTTGTTTCTGTGGTCGAAGATGTTATTCAACAGCATGGTCGCAGGTTGAGCGATGTCAACTTGGCGTCAAGAAAAGCTGAAGAAGCTTCCTTGAGAAGGTATGAAGCAGCTGGTTGGCTGAGAAGGAAGGTTGGAGTTGTTGGAGGGAAAGATTTGCCAGCTGAGCCTTCTGAAGAAGATTTTAGGATTGGATTGCGTAGTGGGATTATCCTTTGCAATGTTCTTAACAAAATTCAACCCGGATCAGTGCCCAAGGTGGTTGAAGCACCCTGTGATTCTACTAATATTCCTGACGGGGCAGCACTGTCTGCATATCAATACTTTGAAAATGTAAGGAATTTTCTTGTAGCTATGGAGGAAATGGGGCTTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGATAGTGAATTGTGTTTTAGCGCTTAAGTCCTACGCTGAATGGAAACTCGGAGGGCAAAATGGGTCATGGAAATATGGTGGGAATGGGAATGCAAAGCCACCTACCTTTGGGAAGCCAATTTTGAGGAAAAACTCAGAACCATTCATGAAGTCTTTATGGAATATGCCATCAGGAGACAAGGATGGTTATATGAGTGATCATTCTTCATACAGTGATCCCGGACATGATCGAAATGAAGGGGGTTCCTTTCCTTCCTTGAATTCATTAGTTCGTCAATATTTATCTGACAAGAAGCCGGAGGAAATTCCCATTGTAGTGGAATCCCTGCTTAGCAAAGTCATGGAGGAGGTTGAACGTCGTATGTTAATCCAACAAGAAACATCTAAAGTAACTCAAGAAGACAAGGCATTGTCTGAAACAGGATGTTCAATTTCAAAAGATGCTTCAATTGATGAAGAGATGGAAGAAAAGGTAGATGAACAAGACTTAAGTATTGTTAAGATGGAAGAAAATGATGATGGACAGGACCTACAAGATAAACAAGAGGAATGTGATGATGAGAAGTATAAGAATGATGAAGAATCAAGTCACCAGAATTTGAAGCAACAAATGATAGTTCAACAGCAGAATATAACCATTCAGGAATTGAAAAATACCATCTACCAAACAAAATCAGGAATGCAATTTCTCCAAATGGAATACCAGAAAGAGATCATCTATCTAGGTAAGCACATGCATAGCCTAGCTTCTGCTGCTTCGGGATATCATAAAGTTCTTGAAGAAAATCGCAAGTTATATAATCAAGTGCAGGATCTAAAAGGAAGTATAAGGGTGTACTGTCGAGTTAGACCTTTCTTGGGTGGGCAACCAAACCATTATAGCAGTGTCGGTAATGTGGAGGCGGGAAGTATATCAATCTTAACCCCTTCCAAATATGGGAAAGAAGGGAAAAAGACATTTAATTTCAATAGAGTGTTTGGTTCTTCTGCAACCCAAGATGAAGTTTTCTCAGATACTCAGCCTTTGATTCGTTCTGTTCTTGATGGATACAATGTTTGTATATTTGCATATGGCCAGACAGGATCAGGAAAAACATATACTATGAGTGGACCAGATGACCTTAATGAGGAGACCATAGGTGTTAATTACCGTGCACTGAGAGATCTTTTCTTTCTCTCAGAGCAGAGGAAAGACGTCATTACTTATGAAATCTCTGTTCAGATGCTTGAGATTTACAATGAACAAGTTAGAGACCTACTAGCCACAGATAGTTCTAACAAAAGATATCCTTTACTAATCTATATACTGAAAATTCGTAACAGTTCTCATAATGGCATCAATGTGCCAGATGCCAACCTTGTTCCAGTTTCGTCGACTTCCGATGTCATAAATTTGATGAACCTGGGGAACAAGAATCGAGCTGTTGGTGCAACTGCCATGAATGATCGTAGTAGTCGTTCTCACAGCTGCCTCACAGTTCATGTCCAAGGAAAGAACCTAACATCAGGAAGTACTATGCGTGGGAGTATGCATCTTGTTGACTTGGCAGGAAGTGAGAGAGCTGATAAAACTGAAGCCACGGGGGATAGACTCAAGGAGGCTCAACATATCAACAAGTCACTTTCCGCCTTAGGAGATGTAATCTCTTCCCTTGCCCTAAAGAATTCACATGTTCCCTACAGGAACAGTAAACTTACTCAGTTGCTTCAAGATTCTCTTGGAGGGCAAGCAAAGACCCTCATGTTTGTTCATATTAGTCCAGAGCCTGATGCTCTTGGAGAAACACTTAGCACACTGAAGTTCGCTGAACGAGTCTCAACTGTTGAACTTGGTGCTGCCCGGGTTAATAAAGACAATGGCGATGTAAAAGAGCTTAAAGAACAGATTGCTAGTCTAAAGGCAGCATTAGCAAGAAAGGATGGAGGAGAAGGAGAACACTTTCAACAATCTATCAATAGTGGCCATGAGGTACCAAAGTTGAAATCCTATGCCTCTTCTCCTCCCATACAACGTAGTTGGGCATCTGGAGGCCGTAACAAGCTACCAAAAGATGATTCTAGTAGCATAGAGGACCAGAAAAAAGGTGCATCAAAGCTGAAAAGACGAAGCCTAGATCTCCATGACATGTATAAAAGGCCTGCATGGCCACATGTTAACAGCCATGGGGTAAATGGAAAAGAGGATGATAAGGAGTCAATTTCCGGAGATTCGGTTGATAAGGTTATGATGAACAGGAATGACAGCTTAACTAGTGATGATAGCCTTGTGGGACAATGGGAAGCAGAATGTAAACAATTTTCTCCATTATTAAGTCCCAGTTCTCTTTCAGAGTATTCAAAAATATGCTTGGAACAATCCTCACATGGCTATGAGATGGCCACCACATATGAATCTGATGAGCTTGACATTGCAACTAGTGATTCTTCAGAATCAGACTTGAATTGGCTATCACCTGCACCCAAACCAACCACCCTTTCAAATGGATTAGGCTCTAAACAAAAAAAATCAACAAATTCCAGACCAACTAAGAACCCAGAAACCAGAAGCATGATCCCATCATTAATTCCTACTCCATCAAGGAAGCAACCTACCCTAGGTAGTTTAGCCAGAAAGCAACCGGGATCTATTGATGTTAAGAGAAGATCTGGGAGTGCAAAGTGA 3108 0.4118 METEQVLSFSVVSVVEDVIQQHGRRLSDVNLASRKAEEASLRRYEAAGWLRRKVGVVGGKDLPAEPSEEDFRIGLRSGIILCNVLNKIQPGSVPKVVEAPCDSTNIPDGAALSAYQYFENVRNFLVAMEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYAEWKLGGQNGSWKYGGNGNAKPPTFGKPILRKNSEPFMKSLWNMPSGDKDGYMSDHSSYSDPGHDRNEGGSFPSLNSLVRQYLSDKKPEEIPIVVESLLSKVMEEVERRMLIQQETSKVTQEDKALSETGCSISKDASIDEEMEEKVDEQDLSIVKMEENDDGQDLQDKQEECDDEKYKNDEESSHQNLKQQMIVQQQNITIQELKNTIYQTKSGMQFLQMEYQKEIIYLGKHMHSLASAASGYHKVLEENRKLYNQVQDLKGSIRVYCRVRPFLGGQPNHYSSVGNVEAGSISILTPSKYGKEGKKTFNFNRVFGSSATQDEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDDLNEETIGVNYRALRDLFFLSEQRKDVITYEISVQMLEIYNEQVRDLLATDSSNKRYPLLIYILKIRNSSHNGINVPDANLVPVSSTSDVINLMNLGNKNRAVGATAMNDRSSRSHSCLTVHVQGKNLTSGSTMRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISSLALKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAARVNKDNGDVKELKEQIASLKAALARKDGGEGEHFQQSINSGHEVPKLKSYASSPPIQRSWASGGRNKLPKDDSSSIEDQKKGASKLKRRSLDLHDMYKRPAWPHVNSHGVNGKEDDKESISGDSVDKVMMNRNDSLTSDDSLVGQWEAECKQFSPLLSPSSLSEYSKICLEQSSHGYEMATTYESDELDIATSDSSESDLNWLSPAPKPTTLSNGLGSKQKKSTNSRPTKNPETRSMIPSLIPTPSRKQPTLGSLARKQPGSIDVKRRSGSAK. 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05718 1035 MobiDBLite consensus disorder prediction 953 1018 - -
Seca1g05718 1035 MobiDBLite consensus disorder prediction 276 294 - -
Seca1g05718 1035 Coils Coil 764 784 - -
Seca1g05718 1035 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Seca1g05718 1035 FunFam Kinesin-like protein KIN-14I isoform A 419 799 - -
Seca1g05718 1035 Gene3D - 33 163 IPR036872 -
Seca1g05718 1035 PRINTS Kinesin heavy chain signature 498 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05718 1035 PRINTS Kinesin heavy chain signature 658 676 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05718 1035 PRINTS Kinesin heavy chain signature 707 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05718 1035 PRINTS Kinesin heavy chain signature 627 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05718 1035 SMART ch_5 42 160 IPR001715 GO:0005515
Seca1g05718 1035 MobiDBLite consensus disorder prediction 832 863 - -
Seca1g05718 1035 MobiDBLite consensus disorder prediction 208 232 - -
Seca1g05718 1035 MobiDBLite consensus disorder prediction 330 346 - -
Seca1g05718 1035 MobiDBLite consensus disorder prediction 953 1035 - -
Seca1g05718 1035 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Seca1g05718 1035 SUPERFAMILY Calponin-homology domain, CH-domain 43 173 IPR036872 -
Seca1g05718 1035 ProSitePatterns Kinesin motor domain signature. 657 668 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca1g05718 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 789 IPR027417 -
Seca1g05718 1035 Pfam Kinesin motor domain 430 756 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05718 1035 ProSiteProfiles Kinesin motor domain profile. 424 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca1g05718 1035 Pfam Calponin homology (CH) domain 43 162 IPR001715 GO:0005515
Seca1g05718 1035 MobiDBLite consensus disorder prediction 276 346 - -
Seca1g05718 1035 CDD CH_AtKIN14-like 42 159 - -
Seca1g05718 1035 MobiDBLite consensus disorder prediction 309 323 - -
Seca1g05718 1035 Coils Coil 300 320 - -
Seca1g05718 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 997 IPR027640 GO:0003777|GO:0007018
Seca1g05718 1035 MobiDBLite consensus disorder prediction 789 883 - -
Seca1g05718 1035 Gene3D Kinesin motor domain 419 797 IPR036961 -
Seca1g05718 1035 CDD KISc_C_terminal 422 759 - -
Seca1g05718 1035 SMART kinesin_4 422 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05718 Seca-Chr1 160655168 160661541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05718 412 757 Calmodulin-binding Proteins AT5G65930 41.618 1.01e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05718 K10406 - gmx:100799535 1545.02