Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g05548 | ATGACAGAGCCTTTTTTTTGGTCGGCTGATTTTGTATGTGCAGATACGTTGGAAAAGGTTCAAGCCATATTGCTGAAATGGATGCTTATATTATCATGCCTGGTATTTATAGTCGAGTCTGGTATAAATGATAAAACACTGGACCCACCATCGCTGTCTGTGGCTAGATCACCTTTGGCCTCTTATGTTGTCCACAATCTGCCTCTACCATCAAATTCCCATAGGTTAAAGCATGTGCATTCTCATGGTGCACCAATTGCAGCACCGGCCAATCCTCCTTCCTATGGTCATTTTGCAAATACTGGCCAACCCCCTAAAAGATCACATTTCTCCATACCATTCAAGAAGAGGAGTGAATGGAAACCTCCGATTTCTGGCTTTAAAGATATTGCTCCTATTCATTCTACTGCAGCTGCAGTCCCTTCTGCTTTGGCTCAGCCACCATTGTCCCCTTATGTTTCCAATTGTTGTAAACAAGACATGGTATTGAAACGAGGCAGTAAGAGTTGCCACTGTGTGTATCCCATAAAGCTAGAGATTCTTCTTTTGAGTGTCTCTCAAAATCCTAATTGGAATGTTTTTCTTGATGAATTAGCTACCCAGCTTGGGTTGCAAAATACCCAGATTGAACTGATAAACTTTTATGTACTCAGCTTATCAACATTAAATATATCAATGGATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAATGAAGCTTCTAAAATAAACACTTCACTTTCAAAGCAGAAGGTTCAACTAGACCCTGAATTAATAGGTGGATACAGACTTCTCAATATAACGTGGTTTGAACCTCCGCTTCCTTCTCAAGCTCCTACTTTAGCTGCATCGCCTGTGAAAGCACCTTTATATCATTCACCTACAGCTACATCATCGAGTTCTTTGAATAGGGGAAGGCATTCAAATCTATTTCTTATTCTTGGAATTGCTATTGGCATACTCTTCATTGCTATTGTATCTGTACTTATATTTTGTTCGTGTACGTTGCTGCCGAAGGAAAAAACACCTCCCACAGAAACTGAAAAGCCAAGGACGGAAAGTACTGTTTCTGCTGTGGGTTCTATTCCCCACCCAAGCAGCACACGATTTATTGCTTATGAAGAACTTAAAGAAGCAACAAACAATTTTGAACCAGCGAGTGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTTCTGTAGCAATTAAGAGGCTTACAAGTGGAGGGCAACAAGGTGACAGAGAGTTTCTGGTTGAGGTTGAAATGCTTAGCCGATTGCATCACCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCGTGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAAGCCTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATGAAAATTGCTCTTGATGCTGCAAGAGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACATAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTTAGTCTCAGCTAGGCCAATCCTGAGAGACAAGGACCGGTTGGAAGAGATTGCTGATCCCAAACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTTCGTGTGTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAATATCAAGATTCTGTGTTAGCCTCATCCAATACACGGCCAAACCTGAGACAGTCCTCTAGCACTTTTGAGTTTGACGGAACATCTTCAATGTTCTCCTCAGGTCCTTACTCTGGTCTAAGTGCTGCCTTTGACAATGAGAACATTTCTAGGACGGTGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA | 2052 | 0.4211 | MTEPFFWSADFVCADTLEKVQAILLKWMLILSCLVFIVESGINDKTLDPPSLSVARSPLASYVVHNLPLPSNSHRLKHVHSHGAPIAAPANPPSYGHFANTGQPPKRSHFSIPFKKRSEWKPPISGFKDIAPIHSTAAAVPSALAQPPLSPYVSNCCKQDMVLKRGSKSCHCVYPIKLEILLLSVSQNPNWNVFLDELATQLGLQNTQIELINFYVLSLSTLNISMDITPHKGISFSANEASKINTSLSKQKVQLDPELIGGYRLLNITWFEPPLPSQAPTLAASPVKAPLYHSPTATSSSSLNRGRHSNLFLILGIAIGILFIAIVSVLIFCSCTLLPKEKTPPTETEKPRTESTVSAVGSIPHPSSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTSVAIKRLTSGGQQGDREFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGLVSARPILRDKDRLEEIADPKLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITEYQDSVLASSNTRPNLRQSSSTFEFDGTSSMFSSGPYSGLSAAFDNENISRTVVFSEDLHEGR. | 684 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g05548 | 683 | ProSiteProfiles | Protein kinase domain profile. | 384 | 683 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g05548 | 683 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 364 | 461 | - | - | |
Seca1g05548 | 683 | PANTHER | OS01G0750732 PROTEIN | 555 | 630 | - | - | |
Seca1g05548 | 683 | Gene3D | Transferase(Phosphotransferase) domain 1 | 462 | 557 | - | - | |
Seca1g05548 | 683 | Gene3D | Transferase(Phosphotransferase) domain 1 | 558 | 634 | - | - | |
Seca1g05548 | 683 | Gene3D | Phosphorylase Kinase; domain 1 | 346 | 461 | - | - | |
Seca1g05548 | 683 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 508 | 520 | IPR008271 | GO:0004672|GO:0006468 | |
Seca1g05548 | 683 | ProSitePatterns | Protein kinases ATP-binding region signature. | 390 | 412 | IPR017441 | GO:0005524 | |
Seca1g05548 | 683 | SUPERFAMILY | Protein kinase-like (PK-like) | 370 | 648 | IPR011009 | - | |
Seca1g05548 | 683 | FunFam | Protein kinase superfamily protein | 462 | 536 | - | - | |
Seca1g05548 | 683 | Pfam | Protein kinase domain | 387 | 553 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g05548 | Seca-Chr1 | 159151354 | 159156536 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g05548 | 23 | 683 | Receptor kinase-like Gene Family | AT4G02010 | 62.676 | 0.0 | 868 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Seca1g05548 | Pkinase | 3e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g05548 | - | - | gmx:100793528 | 1087.02 |