Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05447 ATGAGAGTGATACTGCAACTGGCGTTTCAGAGCATCGGCATAGTGTATGGAGACATAGGAACATCGCCGTTGTATGTGTATTCAAGCACATTCACAGATGGCATAAAGCACAACGATGATATATTGGGAGTTCTTTCGTTGATATTTTACACAATCACTCTTATCCCTCTTCTTAAGTACGTCTTCTTCGTCTTACGGGCCACCGATAATGGCGACGGAGGGACTTTTGCTTTGTACTCTCTGATATGCCGTTATGCCAAAGTGGGACTTATTCCGAATCAACAACTTGAGGATGCAGAGGTGTCTAATTACCAGCTAGAGTTGCCAAATAACCGTGAGAAGAGAGCATCAAGGCTTAAGTCTAAGCTTGAGAACAGCCATTTTATGAAGCTCTTCCTCTTATTTGCTACCATGCTTGGCACTTCCATGGTCATTGGTGATGGTGTTCTCACCCCTTGCATCTCTGTTTTATCTGCTGTGGGAGGGATCAAGCAAGCTACTAGCCAAATCACAGATGATCAGATTGTTTTGATATCCGTAGGAATCTTGATAGTCCTCTTCATGGTTCAGAGGTTTGGAACAGACAAAGTAGGTTACAGTTTTGCTCCCATTATCTGCATATGGTTCACCTTCATCGGAGGAATTGGCGTGTACAATTTCATCAAGCATGATGCAACAGTTATAAAAGCAATAAATCCAATATACATAGTAGATTATTTCAGCAGGAACAAGAAAGATGCTTGGATTTCTCTTGGTGGTGTTGTGCTGGCCATAACAGGAACTGAAGCACTATTTGCTGATGTAGGACATTTCACAGTTCGGTCCATACAGATAAGTATGTGCTGTGTGACTTACCCTGCTCTCATATTGGCTTATGCTGGACAAGCCTCCTTTCTTCGCAAAAACAATGAGTTTGTCAGTGAGACATTCTACAAGTCCATACCAGACCCTCTATATTGGCCTATGTTTATCATTGCTGTTATGGCAGCTATCATAGCTTCTCAAGCCATGATCTCAGGGACTTTCTCCATAATCCAACAATCCCTATCATTAGGATGTTTTCCTCGTGTGCGAATTGTACATACATCAACCAAATATGAAGGACAAGTTTATATCCCAGAAGTTAATTACATCCTCATGATTGCATGTATAGCCATCACTGTTGGGTTCAAAACCACCACAAAAATTGGCAATGCCTATGGGATAGCAGTGGTGTTTGTGATGACACTAACATCTGCTTTTCTAGTACTAATCATGATCATGATATGGAAGACCAACATACTTCTGGTTATTAGCTATGTGCTCATCATTGGTTCTGTGGAGCTTCTTTATTTAAGCTCAGTTTTATACAAGTTTGACCAAGGAGGGTACCTTCCTCTTGCATTTGCTGCAGTGCTAATGTTCATAATGTATGTTTGGAACAATGTGTACAGAAGAAAATACTATTATGAACTGGATCATAAGATTTCTCCAGAGAAGCTTAGAGAGATTGCTGGTGATGACACAAGATTCTGTAGAATACCTGGCCTTGCAATGTTTTACTCTGAGCTTGTTCAAGGTATTCCACCTATTTTCAAGCACTATGTAGCAAATGTGCCTGCATTGCACTCTGTACTTGTCTTTGTTACCATAAAATCCTTGCCTATTAGCAAGGTTCCAGTGGAAGAAAGGTTACTTTTTCGCAGAGTACAACCTAAAGAACTCAATGTATTCAGATGTGTTGCTAGATATGGATACAATGATGTGCGCAATGAGAATGAGCCTTTTGAGAAGTTGCTGGTTGAAAGATTGAAGGAGTTTATTGCTGATGAATATTTGTTGTCACAAAATGTGCTACAAGATTGTCAAAGTGGTGAAAATGTGAATGTTGATGGAGCAGAAGAAGCTAGGCATGAAGAGAGGCTGCAAGAGGCAATTGAAAAAGAGATTGAGGCAGTTGAAAAAGCAGCAGGAGCAGGTGTTGTTCACTTGATTGGTGAGAATGAGGTGATTGCTAGCAAAGGAGCTAGCATTGGAAAGAGGATTTTGATTGATTATGCCTACAATTTCTTGAAGAAAAACTTGAGACAGAGTGAGAAAATATTTGATATTCCACACAAACGTATGGTCAAAGTGGGAATGACTTACGAACTCTAA 2136 0.4031 MRVILQLAFQSIGIVYGDIGTSPLYVYSSTFTDGIKHNDDILGVLSLIFYTITLIPLLKYVFFVLRATDNGDGGTFALYSLICRYAKVGLIPNQQLEDAEVSNYQLELPNNREKRASRLKSKLENSHFMKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQATSQITDDQIVLISVGILIVLFMVQRFGTDKVGYSFAPIICIWFTFIGGIGVYNFIKHDATVIKAINPIYIVDYFSRNKKDAWISLGGVVLAITGTEALFADVGHFTVRSIQISMCCVTYPALILAYAGQASFLRKNNEFVSETFYKSIPDPLYWPMFIIAVMAAIIASQAMISGTFSIIQQSLSLGCFPRVRIVHTSTKYEGQVYIPEVNYILMIACIAITVGFKTTTKIGNAYGIAVVFVMTLTSAFLVLIMIMIWKTNILLVISYVLIIGSVELLYLSSVLYKFDQGGYLPLAFAAVLMFIMYVWNNVYRRKYYYELDHKISPEKLREIAGDDTRFCRIPGLAMFYSELVQGIPPIFKHYVANVPALHSVLVFVTIKSLPISKVPVEERLLFRRVQPKELNVFRCVARYGYNDVRNENEPFEKLLVERLKEFIADEYLLSQNVLQDCQSGENVNVDGAEEARHEERLQEAIEKEIEAVEKAAGAGVVHLIGENEVIASKGASIGKRILIDYAYNFLKKNLRQSEKIFDIPHKRMVKVGMTYEL. 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05447 711 Coils Coil 629 649 - -
Seca1g05447 711 NCBIfam potassium uptake protein 7 710 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca1g05447 711 Pfam K+ potassium transporter 8 581 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca1g05447 711 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 5 710 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05447 Seca-Chr1 158266608 158271023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05447 2 711 Inorganic Solute Cotransporters AT4G13420 55.918 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05447 K03549 - zju:107426278 1106.28