Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05365 ATGGGTTCCCTTCCACACCTAGTAGAGGATTGCATGGGTTACCTCCAACTCTACAGCGACGGTTCCATTTTCCGTTCCAATGACATCAAATTCCATGTTTCCGCCATTGAAGACAATTCCGTTACCTTCAAGGATTGCCTCTTCGACAAGAGATTCAATCTCTCTCTTCGCCTCTACAAACCCCAAAATTCAAACCCTAACAACACCAATTGCAATAGCAAGAAGCTCCCTGTGGTGATGTTCCTTCACGGTGGAGGATTCTGTTTCGGATCACGCACGTGGCCTCATATTCACAACTGTTGCGTGCGCCTCTGTTCCGGCCTCCAAGCTCTGGTGGTTGCACCGGATTACCGTCTGGCACCGGAGCACCGGCTGCCGGCGGCGGTGGATGACGCCGTGGAGGCGGTGAGGTGGCTGCAGAGGCAGGGGCTGAGCCTGAAGGAAGAAGGTGGAGACCCTTGGTTGAATGGGGACGTTGACTTTGACCGTGTGTTCATCGTTGGTGACTCATCTGGCGGGAACATTGCGCATCACCTTGCGGTTCGGTTCGGTTCCGGTTCGACTGAAATGGACCCGGTTCGGATTCGAGGGTACGCGTTATTGGCGCCATTTTTTGGTGGGGTGGTTCGAACCAAATCAGAGGAAGGTCCTCCCGAACACATGTTGAACCTTGACTTACTAGACAGATTTTGGAGGCTGTCTATACCTGTTGGAGAGAGCAGAGACCACCCATTGGCGAATCCATTCGGACATGGGAGCCCAAATATTGGAGAATTGAAGCTTGAACCTATTTTGGTGATTGTTGGTGGTAATGAATTGCTTAAGGATAGGGCAGCAAATTATGCAACAAGGTTAAAAGAACTAGGGAAGGACGTTAAATATGTTGAGTTTGAGGGAAGCGAACATGGATTTTTCACCCATGATTCATACTCACAAGTTTCAGAAGAGGTCATCCAAATCATCAAAAGATTCATGGTCGAAGCTTCTAGTTAA 993 0.4945 MGSLPHLVEDCMGYLQLYSDGSIFRSNDIKFHVSAIEDNSVTFKDCLFDKRFNLSLRLYKPQNSNPNNTNCNSKKLPVVMFLHGGGFCFGSRTWPHIHNCCVRLCSGLQALVVAPDYRLAPEHRLPAAVDDAVEAVRWLQRQGLSLKEEGGDPWLNGDVDFDRVFIVGDSSGGNIAHHLAVRFGSGSTEMDPVRIRGYALLAPFFGGVVRTKSEEGPPEHMLNLDLLDRFWRLSIPVGESRDHPLANPFGHGSPNIGELKLEPILVIVGGNELLKDRAANYATRLKELGKDVKYVEFEGSEHGFFTHDSYSQVSEEVIQIIKRFMVEASS. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05365 330 Gene3D alpha/beta hydrolase 16 326 IPR029058 -
Seca1g05365 330 Coils Coil 271 291 - -
Seca1g05365 330 Pfam alpha/beta hydrolase fold 79 305 IPR013094 GO:0016787
Seca1g05365 330 SUPERFAMILY alpha/beta-Hydrolases 5 325 IPR029058 -
Seca1g05365 330 PANTHER ARYLACETAMIDE DEACETYLASE 12 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05365 Seca-Chr1 157444966 157448296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05365 7 324 Carbohydrate Esterase AT5G16080 32.508 1.18e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05365 - - gmx:100803077 555.829