Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05343 ATGAAAACAACTAAAAACACCATCCCTCCTCCTCCTCCACCTCCTCCCCCTCCTTCTCAAACTCTCCCTACCTTCCCTCCTCCTCCTACATGCTCAGTCATCTCTGCTCCAGGTGACATTGACCCTAAAATATGGCCATCCCCTCAAGTGGCTAAAAACCTACTACAAAGGCTTGAGGAAGTTTCAAATGGTGTTAAGTCCAGAAACGTGGTTACCCAATTGTCTTTTGTGCGTGATAAGATAAAAAAGTTAGAAAATAAAGTTGCCAGACTCAAGGAGAGGAACAATGAGAAAGAAATATCAATTTTAATGCATCAAATCCATCATGATGGTAAGTCTTTATCTGATTTTGAGCCTAGTGATTTGAAGTGCTTACTTGGTTACGTGAAGCAAAAACTGGACGAAGTTAGAATGAGAACCAAGCATTTTAAGCAGGTGTTGCCTCCTAATCCCCCTCCACCACCACCACCAGTGTCTTGTCCTCAAGAAAATTAG 495 0.4242 MKTTKNTIPPPPPPPPPPSQTLPTFPPPPTCSVISAPGDIDPKIWPSPQVAKNLLQRLEEVSNGVKSRNVVTQLSFVRDKIKKLENKVARLKERNNEKEISILMHQIHHDGKSLSDFEPSDLKCLLGYVKQKLDEVRMRTKHFKQVLPPNPPPPPPPVSCPQEN. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05343 164 MobiDBLite consensus disorder prediction 1 42 - -
Seca1g05343 164 MobiDBLite consensus disorder prediction 1 33 - -
Seca1g05343 164 MobiDBLite consensus disorder prediction 146 164 - -
Seca1g05343 164 Coils Coil 74 101 - -
Seca1g05343 164 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05343 Seca-Chr1 157197896 157198390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05343 5 161 MADS-box Gene Family AT5G26630 24.684 4.86e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05343 - - gmx:106798339 100.138