LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca1g05339	ATGGAAACAACTAAAAACACACTCCCTCCTCCTCCTCCTCCTCTTCCTCCCCCTCTTTCTCAAACTCTCCCTACCCTCCCTCCTCCTCCTCCTCCTCCTTCTACATGCTCAGTCATCTCTGCTCCAGGTGACACTGACCCTAAAATATGGCCATCCCCTCAAGTGGCTAAAAACATACTACAAAGGCTTGAGGAAGTTTCAAAGGGTGTTAAGTCCAGAAACGTGGTCACCCAATTGTCTTTTGTGCGTGATAAGATAAAAAAGTCAGAAAATCAAGTTGTCAGACTCAAGGAGAGGAACAATGAGAAAGAAATGTCAATTTTAATGCATCAAATCTATCATGATGGTAAGTCTTTATCTGATTTTGAGCCTAGTGATTTGAAGCGCTTACTTGGTTACGTGAATAAAAAACTGAACGAAGTTAGAATGAGAACCAAGCATTTTAAGCAGGTGTTGCCTCCTAATCCCCCTCCACCACCAGTGTCTTGTCCTCAAGAAAATGAGGTCCTAGAGAAACAATCATCCTTAGATTTGGTGAAAGAGGTTGATCAGTTGAATAGTGGTTTTGATAATGATAATAATATAGGTAGTAGTAGCATGGGGCTACCACCACCACATGCAAATCTTAGTAATGTTGATATGGTGTTGCCCCAAGAGAATTTTGGAGGTTTCAATAATGTAAGTGATTTAGGGGTGTTTCCTCCGAGAAATTTTGGAGAACTCATTGGTGAAAGTGACTTAGAATTAGAGGTGTTCTCTCCTAGTGATTTTGGAGGTCTCATTAGTGAGAGTGACTCAGGGTTAGGGGCATTTCGTCTAGAGAATTTTGGAGGTCTCATTGGTGAAAGTGATGAAGGCAATTTTGAAGGTCTCAATGGTGAAAGTGATGAAGGTAATTTTGAAGGTCTCAATGTTGGAAGTGACTCAGGGGTGTTACCTCAAGACAATTTTAGAGGTCTCAATGGTGAAAGTGATTTAGGAATGTTGCTTGAAGACAAACTTGAAGGTCTCAATGGTGAAAGGGGTGATAGTTCACAAGTGTGGCTTGAAGGCAATTTTGGAGATCTCAATAATGGAAGTGATCTCTTAGAGATGTGTAATTTTGAAGGTCTCAATGGTGAAAGTGGTGATAGTTCACAGGTGTTGCCTGAAGGAAATTTTGGAGATCTCAGTGATGGAAGTGATCTCTTAAAGATGTTGTTTGAAGGTAATCTTGAATGTCTCAATGGTGAAAGTAATTCAGGGCTTCTGAATGGAAGCTCTACTGATGAAATTGGAGGCAATAACATATGGCCATCTTATGGACATTCTGAAAGTACAATTGATGGAAGTTACAAGGAAAAAGAGCAACTTAATGAAGAAAATCAAGGAGGGTTTATTAACAACTCTGGAGCCAAAACTCAAGAAGCTGCTATGGGGAGATTCGATGTAAACTTTGTTGACAATAACAATGGAAATAACTTGAATTTTGGATTGCCTACTCATGAAAATTTTGCTAGTAGCAGTGAATTTGGAAGTGCTACTAAAGTGTCTGCATCATTTGGAGGAAATTTTCCTTGA	1560	0.3987	METTKNTLPPPPPPLPPPLSQTLPTLPPPPPPPSTCSVISAPGDTDPKIWPSPQVAKNILQRLEEVSKGVKSRNVVTQLSFVRDKIKKSENQVVRLKERNNEKEMSILMHQIYHDGKSLSDFEPSDLKRLLGYVNKKLNEVRMRTKHFKQVLPPNPPPPPVSCPQENEVLEKQSSLDLVKEVDQLNSGFDNDNNIGSSSMGLPPPHANLSNVDMVLPQENFGGFNNVSDLGVFPPRNFGELIGESDLELEVFSPSDFGGLISESDSGLGAFRLENFGGLIGESDEGNFEGLNGESDEGNFEGLNVGSDSGVLPQDNFRGLNGESDLGMLLEDKLEGLNGERGDSSQVWLEGNFGDLNNGSDLLEMCNFEGLNGESGDSSQVLPEGNFGDLSDGSDLLKMLFEGNLECLNGESNSGLLNGSSTDEIGGNNIWPSYGHSESTIDGSYKEKEQLNEENQGGFINNSGAKTQEAAMGRFDVNFVDNNNGNNLNFGLPTHENFASSSEFGSATKVSASFGGNFP.	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca1g05339	519	MobiDBLite	consensus disorder prediction	1	37	-	-
	Seca1g05339	519	Coils	Coil	79	106	-	-
	Seca1g05339	519	MobiDBLite	consensus disorder prediction	1	48	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca1g05339	Seca-Chr1	157147485	157149044	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca1g05339	37	170	MADS-box Gene Family	AT5G26630	26.667	5.15e-10	57.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca1g05339	-		-	gmx:106798339	173.326