Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05250 ATGCTATCTACCTGCAGATCGGAGAAGATCGCCGCTCAACGCTGTCTACACCTTCCTCTGCTTGCAGATCGGAGCCGCTCAACGCCGTCAAGTTCCTCTGGTTGTAGATCGCGCCACCGCCGCTTCACTGACGCTTCCAGCTCCGCCACTGCTGCCACACTGAGGGCTGCAGATTGCTCCATCGCCCGAAAGCATATCAACACTCTTGCACTGGAGAAGATGCAAAACAGTGAGGAACAAAGGTTTAGAGTTCGGAGATTAGAGATCTCAGATAAGGGCAAAGGTTTCATAGAGTTATTGCAACAGCTCAGCGTTTGTGATTCTGTATCTGACAAGGAATTTGAGGATAGATTTCAAGAGCTCAGTTCCCTTGGAGATGACCATGTTATCTGTGTTATTGAAGACGAGCTTTCTGGGAAGATCATTGCAACAGGGAGTGTGTTTATTGAGAAGAAATTTCTGAGAAATTGTGGCAAAGTTGGGCATATTGAAGATGTTGTTGTGGATTCCAGCGTTCGTGGGAAGCAATTGGGAAAGAAAATAATCAACTTCCTCACGGATCATGCTCGTTCAATGGGGTGCTATAAGGTAATTCTTGATTGCAGCCTTGAGAACAAGGTGTTCTATGAGAAATGTGGCTTCAAGCATCATGCAGTTGAGATGGCTATGTATTTTGTTTGA 681 0.4596 MLSTCRSEKIAAQRCLHLPLLADRSRSTPSSSSGCRSRHRRFTDASSSATAATLRAADCSIARKHINTLALEKMQNSEEQRFRVRRLEISDKGKGFIELLQQLSVCDSVSDKEFEDRFQELSSLGDDHVICVIEDELSGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSVRGKQLGKKIINFLTDHARSMGCYKVILDCSLENKVFYEKCGFKHHAVEMAMYFV. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05250 226 CDD NAT_SF 132 200 - -
Seca1g05250 226 FunFam Glucosamine 6-phosphate N-acetyltransferase 67 222 - -
Seca1g05250 226 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 74 221 IPR039143 GO:0004343|GO:0006048
Seca1g05250 226 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 81 224 IPR016181 -
Seca1g05250 226 Gene3D - 64 222 - -
Seca1g05250 226 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 82 226 IPR000182 GO:0016747
Seca1g05250 226 Pfam Acetyltransferase (GNAT) family 111 214 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05250 Seca-Chr1 155897621 155899657 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca1g05250 Acetyltransf_1 1.1e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05250 K00621 - gmx:100499668 268.085