Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05225 ATGAGTACTGCAATAAAGATGTTACAGAATCTGCTACTATTACTAGTACTACTTGTTTTTCGTTTGCCCACATTGATCCAAGGATCACATCAACATGAAAGAAAGCCGTATATTGTATACATGGGAGAACTACCAGAGACAAGAACCTATGCTGTGGAACAGCATCACCACAACTTGCTGGAGGCTGCAATTGGAGATAACCAGTTAGCCAGAGCATCCAAAATACATAGCTACGGAAAGAGCTTCAACGGATTTGTAGCACAACTCTTGCCACATGAAGCAGAGAAACTACTAGAGGAGGACAATGTGGTATCTGTGTTTCCAAATACACGCCGCAAACTACACACAACAAGGACATGGGATTTTCTAGGAATGCCACTAAAAGTGAAGAGACACCCCAACATAGAAAGCAATATCATAGTGGGCTTGTTAGATACAGGTATTTTTGTGGATTGCCCCAGTTTTGACGACAAAGGGTATGGACCTCCTCCACGTAGATGGAAAGGCAAATGTGTAACTGGAACCAACTTCACTGGTTGCAACAACAAGGTGATTGGGGCAAAATACTTCAATCTTGACCCAAGCAATCCAAGCATAGACAACCCTAGTCCGGTGGACGAGCAGGGCCACGGCACTCACACGTCGTCGACGGTGGTGGGAGGCGTGGTGAATGGTGCAAGTCTTTATGGAATCGGGGAAGGGACGGCACGTGGTGGTGTTCCATCAGCACGTGTCGCGATGTACAAAGTTTGTTGGAGTGTTGGGTGCAGTGACATGGACATGCTTGCTGCCTTTGACGAGGCCATAGCTGATGGTGTCAACTTCTTATCAGTGTCTATAGGAGGACCCTCACGTGACTTCTTCTCTGACCCAATTGCCATTGGCTCATTTCATGCTATGAAGAGAGGGATTCTCACTTCTTGCTCCGCTGGAAATGATGGGCCTCGTCCTATGACTGTTGAGAATGTCGCTCCATGGATTTTAACAGTCGCTGCTACCACCCCTGATAGGCAGTTCACTACCTCTATGGCCTTTGGTGATGGAAAGAACGCCACAGGACTATCTATTAATACCTTTACCCCTGAGAAAAAGATGTATCCGTTGACCAGTGGACTCCTTGCTGCGAACCTTAGTGGAGATGGTTATGGAAGTCCCAGTGGTTGTGATTATGGGACTCTAAGCAAGGACAAGGTGAAGGGGAGGATAGTGTATTGCACTGGGGGTACGGGGAGCCAGGACATGACCATTAAAGAATTAGGGGGAGTAGGGACCATCGTAGGTCTTGATGAGAAAGTAGACGCCTCCTACACCACAGTTATTCCAGGGGTCTATATCGAAGCCTATACTGTGGGAAGAACCATTGAGGAATATATTAATACCACAAAGAATCCTCAAGCAGTTATATACAAGACTACAAGTACACAAGTCCCTGCTCCTTTTCTTGCTTCATTTTCATCTAGAGGTCCTCAACGTATCACCCCCAACATCCTCAAGCCTGACTTGGCTGCCCCAGGAATGGACATACTAGCTGCTTACTCCAAACTGGTAACAGTAACAGGGTACCCTGATGACACCCGTTATGATGTTTTCAACATAATGTCAGGAACATCTATGGCCTGTCCACATGTCGCTGGAGCTGCTGCCTATGTCAAATCCTTCCACCCTGATTGGAGTCCTGCTGCAATTAAATCTGCCCTCATGACCTCTGCCACTCCCATAAAAATTGGTGACAATTTCACAGAACTGGGATCTGGGTCAGGGCAGATTAACCCAGTAAGAGCATTGCATCCTGGACTACTTTATGACATTAGAATGAACTCCTATGCTGCCTTCCTATGCAAGCAAGGCTACAACAGCACTAGCATTGGTATACTAATGGGGGACAAAAGATTTAACTGCTCAAGCGTTAAGCCTGCAAGAGGCACTGATGGAATCAACTACCCTACTATGCATGTCCAGCTCCTTAGTGCTGACTCTAAAATTTCTGCAGTTTTTCATCGGACTGTGACTAACGTAGGACTTGGAAGCTCAACATACAAGGCTAATGTCACAGCACCTAAGGGTCTTTCTGTGAAGGTCATCCCAGATACATTGCAGTTTAGTATGTTGCACCAAGATCTGTCATTCAAGGTTGTCCTGAAGGGGCCTCCAATGTCGGATGAGACAATGGTGTTAACTGCATCACTTGAATGGAATGACTCTAAACATACTGTCAGAAGTCCAATACTTGTCTTTAAACCACCATACTGA 2250 0.46 MSTAIKMLQNLLLLLVLLVFRLPTLIQGSHQHERKPYIVYMGELPETRTYAVEQHHHNLLEAAIGDNQLARASKIHSYGKSFNGFVAQLLPHEAEKLLEEDNVVSVFPNTRRKLHTTRTWDFLGMPLKVKRHPNIESNIIVGLLDTGIFVDCPSFDDKGYGPPPRRWKGKCVTGTNFTGCNNKVIGAKYFNLDPSNPSIDNPSPVDEQGHGTHTSSTVVGGVVNGASLYGIGEGTARGGVPSARVAMYKVCWSVGCSDMDMLAAFDEAIADGVNFLSVSIGGPSRDFFSDPIAIGSFHAMKRGILTSCSAGNDGPRPMTVENVAPWILTVAATTPDRQFTTSMAFGDGKNATGLSINTFTPEKKMYPLTSGLLAANLSGDGYGSPSGCDYGTLSKDKVKGRIVYCTGGTGSQDMTIKELGGVGTIVGLDEKVDASYTTVIPGVYIEAYTVGRTIEEYINTTKNPQAVIYKTTSTQVPAPFLASFSSRGPQRITPNILKPDLAAPGMDILAAYSKLVTVTGYPDDTRYDVFNIMSGTSMACPHVAGAAAYVKSFHPDWSPAAIKSALMTSATPIKIGDNFTELGSGSGQINPVRALHPGLLYDIRMNSYAAFLCKQGYNSTSIGILMGDKRFNCSSVKPARGTDGINYPTMHVQLLSADSKISAVFHRTVTNVGLGSSTYKANVTAPKGLSVKVIPDTLQFSMLHQDLSFKVVLKGPPMSDETMVLTASLEWNDSKHTVRSPILVFKPPY. 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05225 749 MobiDBLite consensus disorder prediction 196 216 - -
Seca1g05225 749 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Seca1g05225 749 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Seca1g05225 749 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Seca1g05225 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 743 IPR045051 -
Seca1g05225 749 FunFam Subtilisin-like protease SBT5.3 26 115 - -
Seca1g05225 749 Pfam Subtilase family 137 577 IPR000209 GO:0006508|GO:0008236
Seca1g05225 749 Pfam Fibronectin type-III domain 645 744 IPR041469 -
Seca1g05225 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 115 IPR037045 -
Seca1g05225 749 Gene3D - 336 474 - -
Seca1g05225 749 CDD Peptidases_S8_3 113 571 IPR034197 -
Seca1g05225 749 CDD PA_subtilisin_like 346 468 - -
Seca1g05225 749 SUPERFAMILY Subtilisin-like 114 599 IPR036852 GO:0004252|GO:0006508
Seca1g05225 749 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Seca1g05225 749 FunFam Subtilisin-like protease SBT1.5 138 358 - -
Seca1g05225 749 Pfam Peptidase inhibitor I9 37 115 IPR010259 -
Seca1g05225 749 ProSiteProfiles Serine proteases, subtilase domain profile. 119 595 - -
Seca1g05225 749 Gene3D Peptidase S8/S53 domain 138 608 IPR036852 GO:0004252|GO:0006508
Seca1g05225 749 Gene3D - 612 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05225 Seca-Chr1 155559576 155564280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05225 7 569 Subtilisin-like Serine Gene Family AT5G03620 61.806 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05225 - - gmx:100793716 1141.33