Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05099 ATGGTGGCAACAGAGTTCACTAGCAGTAACCTTGGTAGTTGGAGAGGAATGAAGACCTTCAGCTACCATGTTCTCACCGGCCGTTGGTTCATGTTATTTGCCTCTTTACTAATCATGGCCGTTGCTGGGGCAACCTACATGTTTGGTCTATACTCTAATGAGGTAAAAACCTCTTTAGGCTATGACCAAACCACTCTCAACTTGCTCAGCTTCTTCAAAGACCTTGGTGCCAATGTTGGAGTTATATCCGGGTTAATCAATGAGGTCACCCCACCTTGGGTGGTACTCTTAATTGGGGTCATTATGAACTTCTTTGGGTACTTCATGATATGGCTTTCTGTCACTGGTCACATTCCCAAACCCCAAGTTTGGCAAATGTGTCTTTACATTTGCATTGGGGCAAATTCTCAAACTTTTGCCAACACTGGTGCTTTAGTCACTTGTGTCAAGAATTTCCCAGGTAGCCGTGGCAGTGTTTTAGGCATTCTAAAGGGTTATGTTGGTCTAAGTGGTGCCATAATCACACAGCTTTACCATGCTTTCTATGGTGACAACACACAAGCTCTTATCTTGCTCATTGCTTGGCTTCCTGCTGCTGTTTCCTGTTTTTTCCTTCCAACAATTAGGATATTGAAATTGAACACAGTTCAACAACCCAAAGAGAGCAAAGTTTTCTACAACCTTCTATATATTTCACTTGGCCTAGCTGGGTTTCTCATGGTATTGATCATTATCCAGAACAAACTAAGTTTTTCAAGGATTGAATATGTTGCTGATGGCCTTGGGGTTATTTTCTTACTCCTTCTCCCACTTGCTGTGGTTTTCAGAGAGGAATTCAACCTCTTGAAGGCCAAGTCACAAACTTTAACCCACCCATCTCAATTGAAAGTAGTCACTGAAGTTCCACCTCAAAATATAGCATTACCTGAGCAAGAATCACAAGTAGTAGAACCACCAGCTACCACAACTTTGCACAAGAAAAGTTCTTGTTTAGCAATGCTCAAACCCCCAAACAGGGGAGAAGACTACACCATTTTGCAAGCCCTGTTTAGTATTGACATGTTGATTCTTTTCATTGCAACAACTTTTGGTGTTGGTGGAACATTAACAGCCATTGATAATCTTGGACAAATTGGGCACTCATTAGGATACCCTAGTAAGAGCACCACCACTTTTGTGTCCTTAGTAAGCATATGGAACTACTTGGGAAGAGTTGTTTCTGGTTATGCATCTGAAATCTTTTTGACCAAATACAAATTCCCTCGTCCATATATGCTCACACTAGTTATGCTTCTCTCTTGTGTTGGCCATATTCTCATAGCCCTTGGTGTCCCAAACTCTCTCTACTTTGCCTCAGTGATTATTGGGTTCTGTTTTGGGGCTCAATGGCCATTAATGTTTGCAATCATATCAGAAATATTTGGCCTAAAATACTACTCCACTTTATACAATTTTGGAGCTGTGGCAAGCCCAGTTGGATCATACATACTAAATGTGAGAGTGACTGGTTATTTGTATGATAAAGAGGCTTTGAAGCAATTGGAGGCAAAAGGTCTCACAAGACAAGAAGGGAAGGATCTAACTTGTGTAGGAGTAGAATGCTACAAGATGGCATTTTTCATAATCACAGCTTCAACTTTGATTGGTTGTTTTGTTTCATTCATTTTGGTTCTAAGGACTAGAAAATTTTACAAAGGAGACATCTATAGGAAGTTCAGGGAAGAAGTTGAAGCAGCAGAGACTGAGATGGAGGCTGCAAAAACTAGCACTGTTGTTTCTGAAACTGAAGGCAACGTAACCTTAAGCACCACTGGGGCTACTCCTGCCACCACGAGTGGCTCACAGGAATCAGAGACAAACAATAGAAAGTGA 1872 0.4135 MVATEFTSSNLGSWRGMKTFSYHVLTGRWFMLFASLLIMAVAGATYMFGLYSNEVKTSLGYDQTTLNLLSFFKDLGANVGVISGLINEVTPPWVVLLIGVIMNFFGYFMIWLSVTGHIPKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSVLGILKGYVGLSGAIITQLYHAFYGDNTQALILLIAWLPAAVSCFFLPTIRILKLNTVQQPKESKVFYNLLYISLGLAGFLMVLIIIQNKLSFSRIEYVADGLGVIFLLLLPLAVVFREEFNLLKAKSQTLTHPSQLKVVTEVPPQNIALPEQESQVVEPPATTTLHKKSSCLAMLKPPNRGEDYTILQALFSIDMLILFIATTFGVGGTLTAIDNLGQIGHSLGYPSKSTTTFVSLVSIWNYLGRVVSGYASEIFLTKYKFPRPYMLTLVMLLSCVGHILIALGVPNSLYFASVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVRVTGYLYDKEALKQLEAKGLTRQEGKDLTCVGVECYKMAFFIITASTLIGCFVSFILVLRTRKFYKGDIYRKFREEVEAAETEMEAAKTSTVVSETEGNVTLSTTGATPATTSGSQESETNNRK. 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05099 623 FunFam Nodulin family protein 345 566 - -
Seca1g05099 623 Gene3D MFS general substrate transporter like domains 347 564 IPR036259 -
Seca1g05099 623 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 570 - -
Seca1g05099 623 MobiDBLite consensus disorder prediction 586 623 - -
Seca1g05099 623 MobiDBLite consensus disorder prediction 583 623 - -
Seca1g05099 623 Pfam Nodulin-like 28 275 IPR010658 -
Seca1g05099 623 Pfam Major Facilitator Superfamily 358 561 IPR011701 GO:0022857|GO:0055085
Seca1g05099 623 Coils Coil 569 589 - -
Seca1g05099 623 CDD MFS_Mch1p_like 27 550 - -
Seca1g05099 623 SUPERFAMILY MFS general substrate transporter 28 566 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05099 Seca-Chr1 153810266 153812137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05099 17 575 Nodulin-like Gene Family AT2G39210 68.393 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05099 - - gmx:100818752 924.465