Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05095 ATGGCTCGCACTATCTCGTATATTACAGGGTCGCAGCTTCTCTCTCTGAGACGCCTACCAACACCGACCATCGCCGTCGTTGATGTCAGGGACGACGAGAGGAGTTACGATGGACACATATCGGGGTCTCTTCACTACGCAAGCGACAATTTCTCCGAAAACATGTCAAAGCTTCTTCAGGAAGTTAAAGGCAAAGACACCCTCGTCTTCCACTGCGCTCTAAGTCAGGTTCGTGGCCCAACTTGTGCTAGGAAGCTTGCAAATTATCTTGAGGAGAGTAAGGAAGATGTTGGAATAAAGAACATTATGATCTTAGAACGTGGCTTCAATGGGTGGGAAGCTTCTGGTAGACCTGTCTGCCGCTGCACTAATGTTCCTTGCAAGGAGAGTGAGAGTGCTTAA 402 0.4851 MARTISYITGSQLLSLRRLPTPTIAVVDVRDDERSYDGHISGSLHYASDNFSENMSKLLQEVKGKDTLVFHCALSQVRGPTCARKLANYLEESKEDVGIKNIMILERGFNGWEASGRPVCRCTNVPCKESESA. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05095 133 Gene3D - 1 132 IPR036873 -
Seca1g05095 133 SMART rhod_4 10 118 IPR001763 -
Seca1g05095 133 ProSiteProfiles Rhodanese domain profile. 20 121 IPR001763 -
Seca1g05095 133 Pfam Rhodanese-like domain 20 114 IPR001763 -
Seca1g05095 133 FunFam Dual-specificity phosphatase CDC25 1 132 - -
Seca1g05095 133 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 4 128 IPR036873 -
Seca1g05095 133 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 5 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g05095 Seca-Chr1 153762113 153769252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05095 1 77 Sulfurtransferasese or Rhodanese AT5G03455 68.831 1.85e-33 111