Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g05039 ATGAAGGGAAAGTTTCTAAGAGGATGTGTTAACAAGTGGAAGAAAATGGGGAGTGGAGTGATACCATGTGCTTCCTTGGATTACTGTTGTAGATGGGCTTTGTGGTCTTCCATACATAAAAGGGACTTCATCCCAAATGATGTCCCAAAGGGTCATTTGGTTGTCTATGTAGGAGAGAATCACAAGAGATTTGTCATCAAGATTACTTTACTCAACCATCCACTCTTCAAGGCCTTGCTGGATCAAGCTCAGGATGAATATGATTTCACAGCAGATTCAAAACTCTGTATTCCTTGCAATGAGAATCTTTTCCTCAGTGTCCTTCATTGTGCCAGCTCTCCACATAAAGAAAGGGTGTTTGTGTGTGTCTGA 372 0.414 MKGKFLRGCVNKWKKMGSGVIPCASLDYCCRWALWSSIHKRDFIPNDVPKGHLVVYVGENHKRFVIKITLLNHPLFKALLDQAQDEYDFTADSKLCIPCNENLFLSVLHCASSPHKERVFVCV. 124
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca1g05039 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 106 IPR003676 GO:0009733
Seca1g05039 123 Pfam Auxin responsive protein 42 109 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca1g05039 Seca-Chr1 153035875 153036246 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g05039 46 118 Calmodulin-binding Proteins AT4G34750 44.156 1.29e-18 74.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g05039 K14488 - vvi:100253355 199.134