Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04992 ATGGAAATGGCAACAGGGGATGCATCCAGTTATTCTCTACAACACACTCCAACATGGGCAATTGCCATTGTTTTTTTCCAACTTACCTCAATCTCAATCATCTTGGAACATCTCATTCATCTTATAATCAAATGGTTGAGGAGACATCGGAAGAGCGATTTGATTAAAGCAATTGAGAAGCTTAAATCAGAGTTGATGATGTTAGGATTTGTGTCGCTTTTGTTGACAGTCAGTCAAGACGCTATCACAAAAATCTGCATACCATCAAAGACTGCAGACACTATGCTTCCCTGCAGTTCCAAACTTGGTCCAATTCCAAACAATGATACTCTGCTTTTTTATTTTTGCAGTGCCAAATTAATTAATTATTACTTGATTTGCATGGTGCAGAAGGGTAAGGTTGCTTTAGTATCGAAAAAAGGGATCCATGAACTTCACTTGTTCATTTTTGTTCTAGCCGTCATGCAAATTGTGTACAGTGTTCTCACCATGGCTTTGGCAAGGGCTAAGATGAGACACTGGAAAACTTGGGAGAAAGAAACTCAAACAATTGGTTATCAAGTTTCCAATGGTAAGCACATATTTTACATTTGGCTTCAGCAGCGATGGATTTATTATCAAAATTAG 627 0.3796 MEMATGDASSYSLQHTPTWAIAIVFFQLTSISIILEHLIHLIIKWLRRHRKSDLIKAIEKLKSELMMLGFVSLLLTVSQDAITKICIPSKTADTMLPCSSKLGPIPNNDTLLFYFCSAKLINYYLICMVQKGKVALVSKKGIHELHLFIFVLAVMQIVYSVLTMALARAKMRHWKTWEKETQTIGYQVSNGKHIFYIWLQQRWIYYQN. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04992 208 PANTHER MLO-LIKE PROTEIN 1 10 187 IPR004326 GO:0006952|GO:0016020
Seca1g04992 208 Pfam Mlo family 12 197 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04992 Seca-Chr1 152495244 152497429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04992 12 195 MLO family AT2G39200 44.949 3.33e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04992 K08472 - gmx:100787201 235.728