Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04973 ATGGAGAGTAGCCTACTCTTCCTGTCCTCTCTCGCACTCTCACTCTTACTGCTACTCCCCTCGCGTTTTTCCTCTGCTCAGATCATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTGCAGAAAAATTCACTGATGAAATTGGTCTTGAATGGACTCCTGATGATAAGCTTGCTTCTGGAGAAACAAGCACTATATCAGTTGCTAATGAGACACGGAAGCAATACATGACATTACGACACTTTCCTGCTGATTCCAGGAAATACTGCTACACACTTGATGTTGTAAGTAGGACAAGGTACCTACTGAGGGCCACGTTTTTGTATGGGAACTTTGACAAAAACAATGTTTATCCTAAATTTGACATTTCTGTTGGGGCTACACACTGGTCTACTATTGTTATATCTGATGCTAACATTATAGAAATGCGAGAGCTTATATTCTTGGCTTCAAGTCCTACAGTAAGTGTATGCTTATCAAATGCAACAACTGGTCAGCCATTCATTTCCACGCTTGAACTTCGACAATTCAATGGTTCAGTTTATTATACACAATTTGAGGAACAATTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGATAGCGATACTCCAATCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCTGATTCTGTAAAGAAAGCAAATTATCTTGTTGATGTTGCAGCTGGAACTGAGAAAATTTCTACCAATGTACCAATTGATGTTAACAGAGATGAAATGCCACCAGTGAAAGTAATGCAGACAGCTGTAGCGGGCACAAATGGATCTCTAACTTACCGGTTGAACTTGGATGGTTTCCCTGGTACTGGTTGGGCAGTCACCTATTTTGCAGAGATTGAAGATTTGGGTCCAAATGAGTCTAGAAAATTCAGGCTAGTGCTTCCAGGCCAGCCTGATCTTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAAGGGAAATATCGCCTTTATGAACCAGGATTTACCAATTTATCCCTTCCCTTTGTACTTTCCTTTAGATTTGGCAAGACATCTGATTCTTCCCAAGGACCCCTCCTAAATGCAATGGAGATAAATAAGTATCTGGAGAAAAATGATGGTTCTCCAGATGGAGCAGCTATTTCCAGTGTACTTTCCCACTACTCTTCAGCAGACTGGGCAAAAGAAGGAGGTGATCCATGTCTTCCTGTTCCATGGTCATGGGTCCACTGTAGCTCAGATCCACAACCAAGAATAGTTTCAATCTTGTTATCCAGTAAAAACTTGACTGGGAATATTCCTTTGGAAATCACCAAATTGGTTGGTCTTGTTGAACTATGGCTTGATGGAAATATGCTGACCGGTCCACTACCAGATTTTACTGGATGCATGGACTTAAAGATCATTCATCTTGAAAACAATCAGTTGACCGGCGTGCTCCCAACCTCTTTGGTGAACCTTCCAAGTTTGAGGGAACTATATGTGCAAAATAATATGTTATCTGGAACAGTACCATCAGATCTCCTGAGCAAAGATTTGGTTTTGAACTACTCTGGAAATCTTAATCTTCATAGAGGAAGCAGAATAAATAGCCACATGTATGTTATTATTGGTTCCGCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGTATATGCGTAAAGGCAAGAGAAGATATTATGAGCGAGACCACATTGTTTCTGTCCCTACTCAAAGGCTGGTTTCTTGGAAGAGTGATGATCCTGCAGAAGCTGCTCATTGCTTCAGTTTTTCTGAAATTGAAAATGCTACAAATAACTTTGAAAAAAAAATTGGTTCTGGTGGTTTCGGTGTTGTATACTATGGGAAACTAAAAGATGGAACGGAGATTGCAGTCAAAGTTCTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGCCGAGAAGAAGAGCATAGTATGCTTGTCTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCCCATTAGCGCATGGACGGAGTATCAATTGGATTAAGCGCCTTGAGATTGCTGAAGATGCTGCCAAAGGGATTGAATATCTTCATACAGGTTGTGTTCCGGTTGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTTGATAAGCACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCCAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATTGTTCGGGGGACAGTAGGATATCTGGATCCAGAGTACTATATTTCCCAGCAGTTGACTGACAAAAGTGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCGAATGAAAGCTTTGGTGTGAATTGCCGCAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGCATTATTGATCCCTTGCTAAGGAATGACTATGACCTCCAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGACATATGCGGCCATCAATTTCAGAAGTTCTAAAGGAGATACAAGATGCAATATCTATTGAGAGGGAGGTTGGAACATTAAGAGAAGGCAATTCAGATGAGATGTCAAGAAATTCTTTTCATTCTTCCATGAACATGGGTTCAATGGATTTGGGTGGAGCTGACAGTTACCTGTCAATTGATGAATCCATTTCACAGCCAACAGCAAGATAG 2793 0.4049 MESSLLFLSSLALSLLLLLPSRFSSAQIMQGFVSLDCGGAEKFTDEIGLEWTPDDKLASGETSTISVANETRKQYMTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDKNNVYPKFDISVGATHWSTIVISDANIIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEEQFYLSVSARINFGADSDTPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTNVPIDVNRDEMPPVKVMQTAVAGTNGSLTYRLNLDGFPGTGWAVTYFAEIEDLGPNESRKFRLVLPGQPDLSKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFRFGKTSDSSQGPLLNAMEINKYLEKNDGSPDGAAISSVLSHYSSADWAKEGGDPCLPVPWSWVHCSSDPQPRIVSILLSSKNLTGNIPLEITKLVGLVELWLDGNMLTGPLPDFTGCMDLKIIHLENNQLTGVLPTSLVNLPSLRELYVQNNMLSGTVPSDLLSKDLVLNYSGNLNLHRGSRINSHMYVIIGSAVGASVLLLATVISCLYMRKGKRRYYERDHIVSVPTQRLVSWKSDDPAEAAHCFSFSEIENATNNFEKKIGSGGFGVVYYGKLKDGTEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEEHSMLVYEFMHNGTLKEHLYGPLAHGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLRNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIEREVGTLREGNSDEMSRNSFHSSMNMGSMDLGGADSYLSIDESISQPTAR. 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04973 930 Pfam Malectin-like domain 35 365 IPR024788 -
Seca1g04973 930 Gene3D Ribonuclease Inhibitor 379 529 IPR032675 -
Seca1g04973 930 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 678 886 - -
Seca1g04973 930 FunFam Leucine-rich repeat protein kinase family protein 377 529 - -
Seca1g04973 930 FunFam Leucine-rich repeat receptor-like protein kinase 580 677 - -
Seca1g04973 930 SMART serkin_6 602 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g04973 930 CDD STKc_IRAK 608 875 - -
Seca1g04973 930 SUPERFAMILY Protein kinase-like (PK-like) 588 872 IPR011009 -
Seca1g04973 930 Gene3D Phosphorylase Kinase; domain 1 578 677 - -
Seca1g04973 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
Seca1g04973 930 MobiDBLite consensus disorder prediction 891 905 - -
Seca1g04973 930 Gene3D - 192 367 - -
Seca1g04973 930 SUPERFAMILY L domain-like 403 518 - -
Seca1g04973 930 ProSiteProfiles Protein kinase domain profile. 602 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g04973 930 MobiDBLite consensus disorder prediction 886 905 - -
Seca1g04973 930 Pfam Protein tyrosine and serine/threonine kinase 604 804 IPR001245 GO:0004672|GO:0006468
Seca1g04973 930 Pfam Leucine rich repeat 459 499 IPR001611 GO:0005515
Seca1g04973 930 PANTHER OS07G0107800 PROTEIN-RELATED 465 878 - -
Seca1g04973 930 Gene3D Transferase(Phosphotransferase) domain 1 678 894 - -
Seca1g04973 930 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04973 Seca-Chr1 152335072 152342268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04973 24 712 Receptor kinase-like Gene Family AT2G37050 68.678 0.0 997
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca1g04973 Malectin_like 1.4e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04973 - - gmx:100784017 1706.81