Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04912 ATGAGAAAACTCTGCTTTAACCCCAAGACGCCGTCGTTTTCCATAGCTCGCCATTCTCTATCTTTGCCTGCTCCCTCAAGTTCAACCTCAAGTCCAATAACTCCACGGCTGAGCCTTCCTGACCCTAGGAGCAGCAACGAAGAGAGATGCATCGAAGAAGCAGAGGCACTGATAATGAAATGGAACGCAGAGAGCTCTGCATACGCCAAAGTCACCTCTCTATTCTACGAAGATAAAAACGAAGCTAAGCAATACATCAATTGCGTTAACCAGCTTCAGAAGGCCATGCATTCCTTGCTCTCTCAGAATCCTTCCTCCGAGAAACTCATCCTCGCTCACAACCTCATGCAAATGGCCATGAAGAGGCTCAATAAAGAGCTCTATCAAATATTATCCATGAACCGTGCCTACCTTGACCCCGAATCCGTCTCCGTCAGATCTTCCCGCACCTCTGTGCACTCCAACACCTCTGACTACGACGACGATTTCACGGCGGAAGAAGACGTTATCGCCGCCGGTGATTCAATCTCGGAAGTTGAACAGGTTTCTTCCATTGCCATGGCGGATCTGAAATCCATCGCTGACTGCATGATCTCTTCTGGTTACGCAAAAGAATGCGTAAGCGTCTACAACTCCATCCGAAAATCCATCATTGACGAAGGCATTTATCGCCTCAACGTGGAGAAACTGAGCTCCTCGCGCGTCAACAAGATGGATTGGGAAGTTCTTGAGTTGAAGATCAAGAGTTGGTTAGAGGCAGTGAGGATTTCAGTTAGGACGCTCTTCAACGGAGAGAGAATCCTCTGCGATCACGTCTTCGGTTCTTCAGAGTCCATCAGAGAAGCTTGCTTCGCAGAGATTTCAAGGGACGGTGCCTCTCTTCTTTTCGGATTCCCTGAACTCGTCGCCAAAACCAAGAAATCTCCGCCGGAGAAGATGTTCCGCGTGCTCGATATGTACACCGTGATAACCGCTCTGTGGCCGGAGATCGAATCAATCTTCTCTTCAGATTCCACCTCCACCTCCGCCATTCGATCTCAAGTCCTCGCTTCGCTTGAACGAATCACCGAGTCGGTGCAAACAATGCTCTCAGAATTCGAATCGACGATCCATAAGGACGCTTCCAGGTTGCCGATGAACGGCGGCGGAGTGCACTCACTCACGATTCAGACGATGAATTACCTATCAATCCTCGCCGACTACAGCAACGCGCTCTCTGACATATTCCTGCGATCGGACTCGCCTCCGCCGCCAAAGTCGTCGTCGTTACCGGATTCTTACTTATACAGTCCAGAATCCGACGACTCGACGGCGCCGGCTCTGACGGCACGTTTCGCGTGGCTGATTCTCGTGCTCCTTTGCAAGCTCGACAGCAAAGCAAAGCATTTGAAGGACGTTTCGCTGTCTTACTTGTTTCTAGCGAACAATCTCCGGCACGTGGTGGCGAGAGTCCGCAGCTCGAATCTGCTGTACGTTCTGAGCGAAGATTGGGCTGCGAAGCACGAAGCCAAGGTGAAACGGTTCGTTGCGAACTACGAGAGAGTGGCGTGGGGGCAAGTGGTTGAGTCGTTGCCGGAAAATCCAACTGCGGCGGATGCGAGGGTGGTGTTTGAGAACTTCAATTTCAGATTCGAAGAAGCGTATCGGAAACAGAATTTGTTTGTCGTAGCTGACAGAGAACTGCGAGACGAAATAAAGGGATCGATCGCGAGAAAAATTGTGCCGAGATATAGCGAGTGGTATAATGTGCTGCTTGCTACGGTGGGATCGGTGAGGGACATGACGAGGATGGAGTATGTCAATTTTACCCCTGAAGATGTTGATAGTTACCTGGCCAACCTCTTCTTTTTCGGAACAAGCTCAGGTGGCGTGTCGTCGTCTTCGTCGTCAGTAACTGCGTCCCCTCACCGGCGACGGAGTTAA 1923 0.5065 MRKLCFNPKTPSFSIARHSLSLPAPSSSTSSPITPRLSLPDPRSSNEERCIEEAEALIMKWNAESSAYAKVTSLFYEDKNEAKQYINCVNQLQKAMHSLLSQNPSSEKLILAHNLMQMAMKRLNKELYQILSMNRAYLDPESVSVRSSRTSVHSNTSDYDDDFTAEEDVIAAGDSISEVEQVSSIAMADLKSIADCMISSGYAKECVSVYNSIRKSIIDEGIYRLNVEKLSSSRVNKMDWEVLELKIKSWLEAVRISVRTLFNGERILCDHVFGSSESIREACFAEISRDGASLLFGFPELVAKTKKSPPEKMFRVLDMYTVITALWPEIESIFSSDSTSTSAIRSQVLASLERITESVQTMLSEFESTIHKDASRLPMNGGGVHSLTIQTMNYLSILADYSNALSDIFLRSDSPPPPKSSSLPDSYLYSPESDDSTAPALTARFAWLILVLLCKLDSKAKHLKDVSLSYLFLANNLRHVVARVRSSNLLYVLSEDWAAKHEAKVKRFVANYERVAWGQVVESLPENPTAADARVVFENFNFRFEEAYRKQNLFVVADRELRDEIKGSIARKIVPRYSEWYNVLLATVGSVRDMTRMEYVNFTPEDVDSYLANLFFFGTSSGGVSSSSSSVTASPHRRRS. 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04912 640 MobiDBLite consensus disorder prediction 21 46 - -
Seca1g04912 640 MobiDBLite consensus disorder prediction 21 41 - -
Seca1g04912 640 Pfam Exo70 exocyst complex subunit 248 612 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca1g04912 640 Gene3D Exocyst complex component Exo70 57 621 - -
Seca1g04912 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 44 615 IPR004140 GO:0000145|GO:0006887
Seca1g04912 640 MobiDBLite consensus disorder prediction 621 640 - -
Seca1g04912 640 SUPERFAMILY Cullin repeat-like 51 615 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04912 Seca-Chr1 151818743 151820665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04912 51 615 EXO70 exocyst subunit family AT3G09520 57.292 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04912 K07195 - gmx:100810548 882.478