Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04906 ATGCAGAGACTCAAAGGAAGCAAGCAGGTTCGTCGACATAGAAAACAGAAGAGTTTTCCTTCCGATTCTGGTTCTTGTGGTAGTGGAGTAGCAGATGAAGATGCGAATTCACTTCAATTGGGATGGAGATCTTCGAAACAACAATTGGGAACTCCCATGAAGAAGTTATTAGCTGCAGAGATGTCCCGAGAAACTGAATCCAAAAGAAGAGCCCCTAGTGTTATTGCCAGATTAATGGGTCTTGATGGGCTTCCGTTGCAGTTGCCTAAGCAACATACAAGTTCCTCAGAAAACCATCTAAAAGGGTCAACACAAGTAGGGAAAACTCGAAGCAGTGGTACATTATATGATGGTCGATCATCTAGGAGAAGCTCAAAGGATCAGCAAGAGTTTAAGGATGTATTTGAGGTCTCTGAGATCCCAAAGGCACAGAGTAGTAGGTATGCGTCGCAGGGGCCTGTGGACTTGAAGATCAGTGATGATGAAATGTCATTCATTGAACAAAAGTTCATGGATACCAAACGCCTTGCTACTTATCAGGATTTGCAGTCTTCACAGGATTCCCATGATACACTAGAGATCCTAGACTCTAACAATGATCTTCTGCAAAAGTACTTTACGCGGCCTGATTCTTTGTTTAAAAAGCATCTAGATGATCTGCAAGCTGCCCCACTCCAATCAAATTTTTGTCATGTAGAAGCTATGAAATCAGATAGGGAGAGGACAGGGTTGAATTACAATGGATCTCATCAGAAGCATCGGGATGGTTTTTCTAACCGTTTTGATAGAAGACACGCAATGCATATTTCACCAAAATCTTCAAAGATTCAGTTTAAGGGAAGAGAGGAACCTGATGCAGCCCCAACAAGGATTGTTGTCCTAAAACCTAATATTGGAAAAGTGCAGAATGCTACCAAATTTGTTTCATCACCTTGTTCTTCACATACTTTCCTGTCTGAGTTTGGAGAGCATGCTGAATTTTCAGATATCAGATTTAGGGACAATGAACTGAATCAAAAGAAAAATTTTCCCGGTACTGCCAGTGCTAGGCATTCAAGGCAAAATTCATGGGAATCCAGAGAAATTGCAAAGGAAATTACTAGCCAAATGAAAAATAGTCTGAATAATAGTTCCATGATATTTTCATCTTCTAGATTAAGAGGATATTCTTGGGATGGTAGCTCATGTAGTTTTTCTGGGAATGAATCTCCAGAGGAATCAGAGGTAACAACTGCAATTCTGGAAAATTCGCTTGACATAAGTAATACTCTCAGGCCATCATCCCATTGCGGTGAATCATCTGTTAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCGCACAAGTCTCAACAAGGCCAATCCATCTGCAGGAGCAACACATTGGCTGAAATGCTTGCTATCCCTGACAAGGAAATGAAAGCAGCTAACTTTGACAGCACCTCTCGGGGAAAAGTTTTCCATGATAAAGTTGCTAGCAGTGATAAACCTGCTGGGTTGACTTAA 1515 0.4119 MQRLKGSKQVRRHRKQKSFPSDSGSCGSGVADEDANSLQLGWRSSKQQLGTPMKKLLAAEMSRETESKRRAPSVIARLMGLDGLPLQLPKQHTSSSENHLKGSTQVGKTRSSGTLYDGRSSRRSSKDQQEFKDVFEVSEIPKAQSSRYASQGPVDLKISDDEMSFIEQKFMDTKRLATYQDLQSSQDSHDTLEILDSNNDLLQKYFTRPDSLFKKHLDDLQAAPLQSNFCHVEAMKSDRERTGLNYNGSHQKHRDGFSNRFDRRHAMHISPKSSKIQFKGREEPDAAPTRIVVLKPNIGKVQNATKFVSSPCSSHTFLSEFGEHAEFSDIRFRDNELNQKKNFPGTASARHSRQNSWESREIAKEITSQMKNSLNNSSMIFSSSRLRGYSWDGSSCSFSGNESPEESEVTTAILENSLDISNTLRPSSHCGESSVSREAKKRLSERWKMSHKSQQGQSICRSNTLAEMLAIPDKEMKAANFDSTSRGKVFHDKVASSDKPAGLT. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04906 504 MobiDBLite consensus disorder prediction 424 458 - -
Seca1g04906 504 MobiDBLite consensus disorder prediction 1 15 - -
Seca1g04906 504 MobiDBLite consensus disorder prediction 434 449 - -
Seca1g04906 504 MobiDBLite consensus disorder prediction 482 504 - -
Seca1g04906 504 MobiDBLite consensus disorder prediction 88 119 - -
Seca1g04906 504 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
Seca1g04906 504 PANTHER AFADIN 11 501 - -
Seca1g04906 504 MobiDBLite consensus disorder prediction 1 131 - -
Seca1g04906 504 Pfam Protein of unknown function (DUF3741) 167 211 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04906 Seca-Chr1 151728908 151731456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04906 50 495 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 38.105 3.09e-68 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04906 - - gmx:100801297 669.077