Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04895 ATGATTGAAAGAGTGAAGTCATTCATAGGTGTAATTTTCATACAATTGGGATATGCTGTCATGGATGTTCTATGCAAGGCTGCTTTAAACAAGGGAATGAGCAATTATGTATTTATTGTCTATCGCCATGCTATTGCCTTCATTGTTATGGCCCCTTTTGCAGTGATCTTGGACAAGAAAGCAAGGCCGAAGATGAAATTTTCAATCTTTATGAAGATAGTCATGCTCAGCGTACTACAGCCAGTTATTACCCAGAATTTATATTTTTCGGGAATGAAGTACACAACAGCAACCTTTGTTGTTGCCATGACCAATATCCTTCCCGTCATTACCTTTATCATAGCTTACATTCTTAAACTTGAGAAGATAGAAATAAAAAGTATACACAGTCAAGCGAAGGTGGTTGGGACTTTAGTAGCTTTTGGAGGTGCTATGGTTATGGCACTAATAAAAGGCCGAATATTTGAGCTTTATGGGACACACGGAAGCAAAAACAACAACCAACATGATAATGGGCCAACTTTTCAACATGTAATAAAAGGTTCAGTGATGATCACAATTGGTTGCATTACTTGGGCTTGTTTCATGATTCTCCAAGCTATTACGCTCAAGGTCTACCCTGCTGAGCTCTCTCTTACGGCATGGATATGCCTATTAGGAACAATAGAAGGCTCCATAGTGGCTCTACTTATGGAAAGGGGCAACCTTTCGGTTTGGTCTTTGAATTGGGACACAGAACTATTGGTTGCTATCTATAGTGGCATAGTTTGTTCGGGATTGACTTATTACATTCAAGGAGTAGTGATGAAATATAGAGGCCCGGTCTTCGTAACAGCTTTTAACCCCTTATGCATGATCATTGTGGCTATCATGGGCTCCATCTTTTTGGATGAGCAAATGTACCTTGGAAGGGTGATCGGTGCCATTATTATTATTATAGGGTTGTATTTAGTGCTGTGGGGTAAAAGCAAAGATTACCACTCACAAAGTACAATTATGAAAGAGCAAGCTACAGACAAGAGCAACAATGTAATAATGAGGTCACCACCATGA 1053 0.3951 MIERVKSFIGVIFIQLGYAVMDVLCKAALNKGMSNYVFIVYRHAIAFIVMAPFAVILDKKARPKMKFSIFMKIVMLSVLQPVITQNLYFSGMKYTTATFVVAMTNILPVITFIIAYILKLEKIEIKSIHSQAKVVGTLVAFGGAMVMALIKGRIFELYGTHGSKNNNQHDNGPTFQHVIKGSVMITIGCITWACFMILQAITLKVYPAELSLTAWICLLGTIEGSIVALLMERGNLSVWSLNWDTELLVAIYSGIVCSGLTYYIQGVVMKYRGPVFVTAFNPLCMIIVAIMGSIFLDEQMYLGRVIGAIIIIIGLYLVLWGKSKDYHSQSTIMKEQATDKSNNVIMRSPP. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04895 350 PANTHER WAT1-RELATED PROTEIN 8 326 IPR030184 GO:0016020|GO:0022857
Seca1g04895 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
Seca1g04895 350 Pfam EamA-like transporter family 12 147 IPR000620 GO:0016020
Seca1g04895 350 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020
Seca1g04895 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04895 Seca-Chr1 151544268 151547136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04895 2 341 Nodulin-like Gene Family AT2G37460 61.765 3.22e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04895 - - vra:106757633 487.648