Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04847 ATGAGTCCTTCATTTGGTGATCAGATAGATGATAAGCCGATTGTTTCTGACTCAATAAGAGCATCATCAAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAGAGAGATTGTTTCCAAGCACAATCCGCCAAATGTAGTTGCAAAATTAATGGGGCTTGAAGCCCTCCCTCGGGGAGAGCATAATTTAGCTGTGGAGAGAAGCCGTAGAGGGGATTATTCTCAACATATGTGCGGTCATTCAGGGGCACCATTCAATCATTGGCAGCTGGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAATTCATCCAAGCACAGAACAGATTGCTTACAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGCAATGCAACACCAGAGAGAGAAAATTGGACTGAAGATGTTAATGAGAAGAAAATGGCCCTCATTCGCCAGAAATTCATGGAAGCTAAACGTCTGTCTACAGATGAGAGACTGCGTCAGTCCAAGGAATTTGATGATGCCTTGGAAATTTTAAGCTCCAATAACGATCTATTAATCAGGTTATTGGATTCCCAAAATCTTTATGAACTTCAGTCTACTCCACCAGCCGAGACAAAGCGTATTACTGTTCTTAAACCTTCGAAGATGATTGATAATGAAAAATCCAGCAGAAAGGGGAAGAAGAACGACAAGCATATTAAGAAAACAGCAAATGCTGGTGCTACATGGGAAAAAAATAGCCCTGGATACTCTCCAGCCAGTCAGAGAGTTGATGAATTTCCAGTTCAACCTACTCGGATAGTGGTATTGAAGCCTAGTTCCGTGAAGACACATGAGATTAAGGCTGTAGTTTCTCCAACAGAATCATCACCTCAAAATATGCAATGTGGAAATTTCTATCAGAGCCCTGAAGATGATGATGTACTGGAATCAAGAAAAGTGGCAAAAGAAATTACACAGCAAATGCATGAAAACATGAGGAGCTATCCAAGAGACGAAACTTTGTATTCTTCAGTATTTTCCAATGGCTATATTGGTGATGATAGTTCGTTCAACAAATCAGATCATGAGTACACTGCAGGGAATTTTAGTGATTTGGAAGTAATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGTCCTTATTCTTCATCATCCTTCAGTCGTGCTTCATGTTCTCCTGAGTCGTCAGTGTGCAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCTATGATGGCATCTACTAAGGGTCCTCAAGAACAAAGGCATATGCGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCAGATATAAAGAAATCTCTAATATCTGAGATTGAAGTCATTAATAAAGAACAAGAACCAAGTGAATCTGTTTCTTGCAGTCGAAATTTCAATGAAGAAATATGTGAGGATGGTTCTCCTAAAAACCTTCCCAGGTCAAAATCTGTTCCTGTATCTTCCACTGTCTATGAAAATGGGCTCAACATTGAAATTTGTAATAATGATGGTAGTAAAGCTCATGAGTCCAAGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACTAGTTTCTTGTTCTCAAGGAATAAGAAATCAACCAAGGAAAAATCTTGTCTATCTCAATCTAAAGATGAGCCCCTATCTACTGTTGCTGAAACATCAGTATCTCCAATAAATTCACCTGAAGTCCTTAGGGATGACGTGTCTCAAAGCTTCAATGATGGCTCCTTTGGAGAGTGTTCTCTTCCAACTCTATTTGAATCATCGAGCAAAACTTTATCAGATTCTGTCTCTAATGGACAGGGTGTAATGTCTCTGGAGCCTGGATTGACTGTGCCAAAGCCCACGGTGCCAGGGATTTCAAGTGAAAACCAGGATCAGCCGAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGATAATGCAGCTCATGAGTCCTTGGACTGTATGAAGGGTGGTCAGCTGGGCTCACGGGTGACACTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCCCGAACCCTCTCGTGGGATGATTCTTGTGCAGAGGTAGCTAGTCCCTACCCATTAAAGCCTTCGTTGGTTTCCTTAGACACCAAAATAGAGGATCAAGACTGGCTTGTCTTGGTCGAGAAACTACTGTCAGCTGCTGGACTTGATGATCAAGTGCAGCCTTACTCGTTTTACTCTAGATGGCACTCCCTTGAAAGTCCATTGGATCCATCATTGAGGGACAAATATGCCAATTTCAATGACAAGGAGCCTCAGCCTCTCCATGAAGCCAAGCGAAGGCAGAGGAGATCTAATCAGAAGCTGGTATTCGATTGTGTCAATGTTGCACTAGTAGAAATTACTGGTTATGGATCAGAAAATTACTCAGTGGGCAGGTTGTGGAGTGGGGGCCACAGAAGGCTCCAAGTCCAAGAGGGTGCACCTGCCCCATTGGTGGACCTCATTGTGGCCCAAATGAAGGAGTTAATATCTAGTGGGATAAGGTCTGTTTGGGGGGATTGTGGGGACAGCAACAGCCTGGTGGTAGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGCTTATGCGATTGGAAATGGATATTTTGGTGAAGGAAGTAGAGGGGAAGTTGCTTGAAGAACTTGTGGAGGATGCGGTGGTTGATTTGACAGGCAGGGCTTGA 2754 0.4227 MSPSFGDQIDDKPIVSDSIRASSNKKINGTPIKMLIDQEMSREIVSKHNPPNVVAKLMGLEALPRGEHNLAVERSRRGDYSQHMCGHSGAPFNHWQLEDRFMDKEMLHEIHPSTEQIAYKDIYEIWLQSQRTSNATPERENWTEDVNEKKMALIRQKFMEAKRLSTDERLRQSKEFDDALEILSSNNDLLIRLLDSQNLYELQSTPPAETKRITVLKPSKMIDNEKSSRKGKKNDKHIKKTANAGATWEKNSPGYSPASQRVDEFPVQPTRIVVLKPSSVKTHEIKAVVSPTESSPQNMQCGNFYQSPEDDDVLESRKVAKEITQQMHENMRSYPRDETLYSSVFSNGYIGDDSSFNKSDHEYTAGNFSDLEVMSPSPRHSWDYINRCGSPYSSSSFSRASCSPESSVCREAKKRLSERWAMMASTKGPQEQRHMRRSSTLGEMLALSDIKKSLISEIEVINKEQEPSESVSCSRNFNEEICEDGSPKNLPRSKSVPVSSTVYENGLNIEICNNDGSKAHESKELTKSKSMKSSFKGKVTSFLFSRNKKSTKEKSCLSQSKDEPLSTVAETSVSPINSPEVLRDDVSQSFNDGSFGECSLPTLFESSSKTLSDSVSNGQGVMSLEPGLTVPKPTVPGISSENQDQPSPISVLEPPFEDDNAAHESLDCMKGGQLGSRVTLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLVSLDTKIEDQDWLVLVEKLLSAAGLDDQVQPYSFYSRWHSLESPLDPSLRDKYANFNDKEPQPLHEAKRRQRRSNQKLVFDCVNVALVEITGYGSENYSVGRLWSGGHRRLQVQEGAPAPLVDLIVAQMKELISSGIRSVWGDCGDSNSLVVESVVRKEVVGKGWVELMRLEMDILVKEVEGKLLEELVEDAVVDLTGRA. 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04847 917 Pfam DUF761-associated sequence motif 50 64 IPR032795 -
Seca1g04847 917 MobiDBLite consensus disorder prediction 224 261 - -
Seca1g04847 917 MobiDBLite consensus disorder prediction 769 788 - -
Seca1g04847 917 MobiDBLite consensus disorder prediction 553 573 - -
Seca1g04847 917 Pfam Domain of unknown function (DUF4378) 732 908 IPR025486 -
Seca1g04847 917 Pfam Protein of unknown function (DUF3741) 155 198 IPR022212 -
Seca1g04847 917 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 5 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04847 Seca-Chr1 150951959 150956688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04847 3 914 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 42.903 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04847 - - gmx:100816611 1499.18