Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04805 ATGGAATCCAAAGTTCAACTCTTTTTCCTTACCTTTTTCCTCCTCAATATTCTTACCATCCATGCAGGAACTCTTGGAACTTACATAGTTCAGCTACACCCTCATGGCACAACCAGCTCTTTGTTTACCTCCAAGCTCCAATGGCATCTTTCATTCATACAACAAACCATTTCCTCTGATGAGGAACCTTCTTCACGCCTCCTTTACTCTTACCGTTCTGCCATGGATGGTTTTGCAGCTCAGCTAACTGAGTCTGAGCTTGAGTACTTGCAAAGGTTGCCTGATGTTATCTCAGTTAGGCCTGACCGGAAGCTCCAGATTCAGACCACCTATTCTTACAAGTTCTTGGGACTGAACCCTGCAAGAGAAAATGGTTGGTATCAGTCTGGGTTTGGCCGTGGCACTATAATTGGGGTGCTTGATACTGGAGTGTGGCCTGAGAGTCCCAGCTTCAATGATCAAGGAATGCCTCCAGTTCCCAAGAAATGGAAGGGTATATGCCAAAAAGGGCAGGCCTTTAACTCTTCCAATTGTAACCGAAAACTTATTGGTGCAAGGTACTTTACCAAAGAATATCTCTCTCCAAGAGACTCCTCTGGACATGGCACACACACTTCATCCACTGCTGGTGGAGTGCCAGTGCCAATGGCAGGTGTGTTTGGTTATGCACAAGGTGTGGCAAGAGGAATGGCTCCTGGTGCCCACATTGCTGTGTACAAAGTGTGCTGGTTCAATGGCTGCTATAACTCTGATATCATGGCTGCAATGGATGTGGCAATCAGAGATGGTGTGGACATTCTGTCTTTGTCTCTAGGTGGCTTCCCAGTGCCTCTATATGATGATAGTATTGCCATTGGAAGCTTTAGAGCAATGGAACATGGGATTTCAGTTATATGTGCAGCAGGAAACAATGGCCCAACAGCAATGTCTGTTGCCAATGAAGCTCCTTGGATTGCCACTATTGGTGCAAGCACACTAGACAGGAAGTTCCCAGCTATAGTTCACATGGGTAATGGACAAGTCCTCTATGGAGAATCCATGTACCCAGTGAACCGACTAAGGAACAATAGCAAAGAACTTGAGCTGGTTTATTTGACTGATGGGGACAGGGAGAGTCAATTTTGCCTCAGAGGGTCTCTTCCAAGGGACAAAGTTCAGGGCAAAATGGTGGTATGTGATCGAGGTGTCAATGGAAGAGAGGCAGGTGGTGCTGCTATGATCTTGGCAAACACAGAACTTAACTTGGAAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGGTAGGATTTGATGAATCAGTCACCTTGAAAGCTTATATAAACTCTACAAAGACGCCCCTTGCTCGAATTGAATTTGGAGGAACTGTAATAGGGAAGTCTAGAGCTCCAGCAGTAGCAAGATTTTCAGCTAGAGGACCAAGTTTTACAAACCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGGGTCAACATCATTGCTGCATGGCCTCAGAACCTTGGTCCTACAGGCCTTCCAGAGGATTCTAGACGAGTAAACTTCTCTGTCATGTCCGGTACCTCAATGTCATGTCCTCATGTGAGTGGAATTGCTGCTCTTATTCGTTCAGCTCACCCAAGATGGAGCCCTGCAGCTATCAAATCTGCAATTATGACAACAGGAAGAGCAATATTAGATGAAGACAAACCAGCAGGAGTTTTTGCCATGGGAGCTGGAAATGTGAATCCACAAAGAGCATTAAACCCAGGCCTGATATATGACATTAGGCCAGATGACTATGTCAACCACCTTTGCAGCCTTGGATATACAAGCTCAGAAATATTCAGCATCACTCACAGAAATGTGAGCTGCCATGCAATCATGCAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCAATCTCAGTAACTTTCAAGGATGGAATGAGGAGAAAGATGTTCAGCAGGAGACTAACAAATGTGGGAAGTCCCAACTCCATCTACTCAGTGGAGGTCATGGCACCTGAAGGAGTAAAAGTGATAGTGAAACCCAAGCGGCTGGTATTTAAACAAATAAATCAAAGCTTGAGTTACAGGGTATGGTTTTTATCGAGGAAAAGGGTCAAAAAAGGTGCTGATATGATGACCTTTGCAGACGGGCATTTGACATGGGTACACTCCCAAAATGGTTCTTACAGGGTTAGAAGCCCAATAGCAGTGACTTGGAAGTCCAAGTAG 2223 0.4512 MESKVQLFFLTFFLLNILTIHAGTLGTYIVQLHPHGTTSSLFTSKLQWHLSFIQQTISSDEEPSSRLLYSYRSAMDGFAAQLTESELEYLQRLPDVISVRPDRKLQIQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQKGQAFNSSNCNRKLIGARYFTKEYLSPRDSSGHGTHTSSTAGGVPVPMAGVFGYAQGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGFPVPLYDDSIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPAIVHMGNGQVLYGESMYPVNRLRNNSKELELVYLTDGDRESQFCLRGSLPRDKVQGKMVVCDRGVNGREAGGAAMILANTELNLEEDSVDVHVLPATLVGFDESVTLKAYINSTKTPLARIEFGGTVIGKSRAPAVARFSARGPSFTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMSCPHVSGIAALIRSAHPRWSPAAIKSAIMTTGRAILDEDKPAGVFAMGAGNVNPQRALNPGLIYDIRPDDYVNHLCSLGYTSSEIFSITHRNVSCHAIMQMNRGFSLNYPSISVTFKDGMRRKMFSRRLTNVGSPNSIYSVEVMAPEGVKVIVKPKRLVFKQINQSLSYRVWFLSRKRVKKGADMMTFADGHLTWVHSQNGSYRVRSPIAVTWKSK. 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04805 740 Pfam Fibronectin type-III domain 631 735 IPR041469 -
Seca1g04805 740 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Seca1g04805 740 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Seca1g04805 740 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Seca1g04805 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 108 IPR037045 -
Seca1g04805 740 CDD Peptidases_S8_3 105 555 IPR034197 -
Seca1g04805 740 Gene3D Peptidase S8/S53 domain 134 595 IPR036852 GO:0004252|GO:0006508
Seca1g04805 740 FunFam subtilisin-like protease SBT1.5 327 459 - -
Seca1g04805 740 Pfam Subtilase family 132 557 IPR000209 GO:0006508|GO:0008236
Seca1g04805 740 Pfam PA domain 361 434 IPR003137 -
Seca1g04805 740 Pfam Peptidase inhibitor I9 27 107 IPR010259 -
Seca1g04805 740 FunFam Subtilisin-like protease SBT1.5 134 338 - -
Seca1g04805 740 FunFam Subtilisin-like protease SBT1.9 17 108 - -
Seca1g04805 740 Gene3D - 599 737 - -
Seca1g04805 740 Gene3D - 327 459 - -
Seca1g04805 740 SUPERFAMILY Subtilisin-like 114 586 IPR036852 GO:0004252|GO:0006508
Seca1g04805 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 521 531 IPR023828 -
Seca1g04805 740 ProSiteProfiles Serine proteases, subtilase domain profile. 110 582 - -
Seca1g04805 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 735 IPR045051 -
Seca1g04805 740 CDD PA_subtilisin_like 334 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04805 Seca-Chr1 150437233 150439533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04805 1 739 Subtilisin-like Serine Gene Family AT1G04110 65.935 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04805 - - gmx:100790205 1300.42