Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04711 ATGGCAAAGGAGCAAATTCAGGTGTTAAATGCACTTGATGTTGCAAAAACACAATGGTACCACTTCACTGCAATCATCATAGCTGGAATGGGTTTCTTCACCGATGCTTATGATCTATTCTGCATATCCCTTGTTACCAAGTTGCTTGGCCGCATATACTATCATGTTGATGGTGCAGAGAAGCCTGCAGCTGCTGTAAATGGGGTAGCTTTCTGTGGAACACTTTCAGGGCAGCTTTTCTTTGGCTGGCTTGGTGACAAGCTTGGTAGGAAAAAAGTCTATGGTATGACTCTGATGCTGATGGTAATATGTTCCATTGGTTCTGGCCTTTCTTTTGGACATACTCCAAAATCTGTCATGGCAACTCTTTGCTTCTTCCGGTTCTGGCTTGGGTTTGGTATTGGTGGAGACTACCCACTTTCTGCTACCATTATGTCAGAGTATTCTAATAAGAAGACTCGTGGTGCCTTCATTGCTGCAGTCTTTGCCATGCAGGGTTTTGGGATTTTGGCAGGTGGTATATTTGCAATTATAATCTCATCTGCATTCAAGGCCAAGTTTGATTCTCCACCATACGAGGTTGATCCACTTGGTTCAACTGTTCCACAAGCAGACTATATTTGGAGGATAATTGTGATGGTTGGTGCACTCCCAGCTGCATTGACTTACTATTGGAGGATGAAGATGCCAGAAACTGCCCGTTATACTGCTCTAGTTGCTAAGAACACACAGCAAGCTGCTGCAGATATGTCTAAGGTTTTGCAGGTTGAGATTCAAGCTGAACCAAAGAAAGATGAGCAGCAAGCTAAATCATATGGCTTGTTCTCAAAGGAGTTCCTTAGTCGTCATGGATTACATCTTCTTGGTACAGCAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAAAATCTTTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATACCTCCTGCAAAAACCATGAATGCTCTTGAGGAGGTTTATAGAATTGCAAGAGCTCAAACACTTATTGCTCTTTGCAGTACAGTTCCAGGCTACTGGTTTACAGTGGCTTTCATTGACAAGATAGGAAGATTTGCTATTCAATTGATGGGATTCTTCTTCATGACTGTCTTCATGTTTGCCCTTGCCATTCCTTATGACCACTGGACTCATAAGGATAACAGAATAGGATTTGTGGTGATGTATTCCTTGACCTTCTTCTTTGCAAACTTTGGACCTAATGCTACCACATTTGTTGTGCCAGCTGAGATTTTCCCTGCTAGATTCCGAGCTACTTGCCATGGAATATCATCAGCAGCCGGCAAGCTTGGGGCTATAGTTGGTGCATTTGGGTTCTTATATTTAGCACAGAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATTCACTCCTTGTATTGGGTGTGGTTAACATTTTAGGCTTCTTTTTCACTTTCTTGGTACCTGAGGCAAAGGGGAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGTTGGAACCAAGGAAGAGTCAGAGCAAACACATTCTTACAGCAACAGCAACAGAACTGTTCCATATGTTTAG 1602 0.4282 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPAAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGMTLMLMVICSIGSGLSFGHTPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISSAFKAKFDSPPYEVDPLGSTVPQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTQQAAADMSKVLQVEIQAEPKKDEQQAKSYGLFSKEFLSRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRATCHGISSAAGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNSLLVLGVVNILGFFFTFLVPEAKGKSLEEMSGENEEEVGTKEESEQTHSYSNSNRTVPYV. 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04711 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 495 - -
Seca1g04711 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 497 IPR020846 GO:0022857
Seca1g04711 533 FunFam Inorganic phosphate transporter 1-6 20 519 - -
Seca1g04711 533 MobiDBLite consensus disorder prediction 518 533 - -
Seca1g04711 533 SUPERFAMILY MFS general substrate transporter 12 504 IPR036259 -
Seca1g04711 533 Pfam Sugar (and other) transporter 26 504 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca1g04711 533 CDD MFS_PhT 25 496 - -
Seca1g04711 533 Gene3D MFS general substrate transporter like domains 20 521 IPR036259 -
Seca1g04711 533 MobiDBLite consensus disorder prediction 501 533 - -
Seca1g04711 533 NCBIfam phosphate:H+ symporter 11 506 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04711 Seca-Chr1 149286661 149288283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04711 1 505 Inorganic Solute Cotransporters AT2G38940 84.302 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04711 K08176 - gmx:100803626 971.459