Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04696 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTCAATACTAATTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATGACAATCCTGATTATTATGATTCTTCAGAAAATAAGTACTGTCAGAAGACCTTGGAACAGTTTGGTGGTGGGAGATTTTCACATGACACTCTAGGTTTAGCCGTGGCAAAGATGTCATATCATGCATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGATGGATCTGTGCAGATAATCAAGTTACAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTAGCTGTAGTCCCCCTTGGTGTTGTTCAGCTTGGCTCTCTAAATAAAGTGATTGAAGATATGGGGTTTGTAAATCATATAAGAAATCTATTTTTGTCTACTCAAGATTACTCAATAGGCCATGTTCCTAGTCAAATACAGAGTAGTTTGAAGAATTCTTCATCTCAGCCAGATGTATTGAAGGAAAATATGTCTTCAGATATTATGCCTGCTTGCTTACGTGATACAGAGAAAACCATGAAGAGTGAAACAGTAGATGTTTTAATGCCCCTTCAATGTTCTGGGAGGAACTATGCACCTCATTCTGCTTATGGGAAAATGGCTGATAATGTGGCCAAACATGAAGGGCCTGAATTTTATAGTGATGAAAGCTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGAGCATCAGGAATTCGATGAGAAGAGACCACTATATGAGAGGAAGTGTGAAGGGGGCAGTAGTGGCTGCAAAAATAGGAGTTTGGAATCGGAAAAAAATGTCTCATCATATTTAAACAATTCTCTTGTGGATAATGCTAGCTTCAGTGATTTAATATGCCCATCAGAAAATGTCAGAGTTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATGCAGTTGTTCATGAAAGTGGTAAGTTGCATTATGCGGATGCTAACCAAAAAGGAATGTTGAATATTGCTAGACCTTCAGATGATAATTCTGAAAAACTTACCAGAAAGTCGTTTCAGACTGAGGCTTGTGACAAGGATACCTCGTACTTTCAAACTGAACCTGGTTACAAGGATAGCTCATACTCATTGTTGAAGTTCCCTGCTGGCTGTGAACTACATGAAGCACTTGGACCATCCTTTTTGAAAGGGAGTAAATATTTTGATTGGCTAGCACAGGTTAATCAAGATATGAAAACTGTGGATATGTCAGATGAGATTAGTACTAGTCAATTGACTTCTGAACCTCATCCAGAACATCTTTTGGAAGCAATGGTGGCCAACATTTGCCACAGTAATAATGATGTTAATAGTGAATTATCATTTTGTACATCAATGCAATCTGCAATGACTTCTGTAAAAAATCCTGAAACTTCTATCCACAATGTGCATACTATTAATTCAGAAGGATATTCAACAGATCAGCCCTCTCTTGTCAGAGACGACAAACACCATTGTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCCTCCAAAGGTGTTTCTTCTACATGTCCTAGTTCATATAGTGAACAGTTTGAAAGGTCTTCTGAACCGTCTAAGAACAGCAAGAAGAGGGCTAGGCCCGGGGAAAGTTGTAGGCCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGCATTGATTTACTACTGGAGCGCGCAATAAAGCACGTGCTCTTTCTCCAAGGCATAACTAAGCATGCAGACAAGCTAACTAAATTTGCTGATACTACATCAAAGTTGCATCACATGGAAACAGACATTCTTGGATCCTCTGAGCAGGGTTCAAGTTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTCTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAGGCCATAAGAAGCTTGGGCCTTACAATTTTGAAGGGTGCAACAAAAGTGCATGATGAGAAGATATGGTTATGCTTTGTTGTTGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAGATTCTGCAATCCAAGAGCACGTTGAACCAATAA 2262 0.4041 MGTNLHQVLRSLCFNTNWNYAIFWKLKHRARMILTWEDAYYDNPDYYDSSENKYCQKTLEQFGGGRFSHDTLGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVTGSGLSFEFADGWQSQFSAGIRTIVVVAVVPLGVVQLGSLNKVIEDMGFVNHIRNLFLSTQDYSIGHVPSQIQSSLKNSSSQPDVLKENMSSDIMPACLRDTEKTMKSETVDVLMPLQCSGRNYAPHSAYGKMADNVAKHEGPEFYSDESSILLQSISNMMNVEHQEFDEKRPLYERKCEGGSSGCKNRSLESEKNVSSYLNNSLVDNASFSDLICPSENVRVDSACFPSVFLDAVVHESGKLHYADANQKGMLNIARPSDDNSEKLTRKSFQTEACDKDTSYFQTEPGYKDSSYSLLKFPAGCELHEALGPSFLKGSKYFDWLAQVNQDMKTVDMSDEISTSQLTSEPHPEHLLEAMVANICHSNNDVNSELSFCTSMQSAMTSVKNPETSIHNVHTINSEGYSTDQPSLVRDDKHHCLSSSSGICGVMSSKGVSSTCPSSYSEQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDLLLERAIKHVLFLQGITKHADKLTKFADTTSKLHHMETDILGSSEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATKVHDEKIWLCFVVEGQNNRNVHRLDILWPLVQILQSKSTLNQ. 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04696 753 MobiDBLite consensus disorder prediction 549 582 - -
Seca1g04696 753 MobiDBLite consensus disorder prediction 560 582 - -
Seca1g04696 753 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 570 619 IPR011598 GO:0046983
Seca1g04696 753 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 750 IPR043561 GO:0003700|GO:0006355
Seca1g04696 753 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04696 Seca-Chr1 149074940 149083894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04696 1 749 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.979 2.42e-170 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04696 - - ccaj:109796613 1225.69