Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04662 ATGCTTCCATATCTCTTACTCCTACCACTCTTGTTCATCCTTCCCGTGCTCTTCTTCTTCTTCTTCTTCGTGAAACCTTCTTCTTCTTCTTCTAACATTACCATCCCAAAAGCGTATCCACTGATTGGTTCCTACTTAGCCCTCAAAGCCAACTCCAAACGCCGCATTCAATGGTTATCCGATATTGTCCAAATTTCACCCGCTGCCACCTTCATCCTCAACGGCACTATGGGTAGAAAACAAGTCATCACCGGCAACCCCGCCATCGTGCAACATATTCTCAAGACCCGATTCTCCAATTACCAAAAAGGCACCACCTTCACCGGCACCCTCTCAGAATTCCTTGGCACAGGAATATTCAACACCAACGGCGACAACTGGAAGTTTCAAAGACAAGTTGCCAGCCACGAATTCAACACAAAGTCTCTCCGTAAATTCGTCGAACACGTGGTGGACGCTGAGCTCTCTGACCGTCTCATCCCCATTCTCACATCCGCCTCTGCAACACAAGACCAAGTCCTCGATTTCCAAGACATCCTCCAACGTTTCGCGTTTGACAACATCTGCAAAATCGCGTTTGGGTTCGATCCAGAATACCTCACGGCGTCCGTTGAGAGGAGCAAGTTCGCGCAAGCTTTCGAAGACGCAACAGAGATCAGCAGCAAAAGGTTCCGCGAGCCGTTTCCCTTAATCTGGAAAATCAAGAAGCAACTGAACATAGGTTCGGAAAAGAAACTGCGAATGGCGGTGAGGGAAGTGCGTGAATTCGCGAGGAAGATAGTGAGAGAAAAAAAGCAAGAACTGAAGGAGAATGCGTCCCTCGATTCGGTGGATATGTTATCACGATTTCTGAGTTCGGGGCATTCGGATGAAGATTTTGTTATGGATATAGTGATAAGCTTTATATTGGCGGGGAAGGATACGACATCGGCGGCGCTGACGTGGTTTTTCTGGTTGTTGTGGAAGAATCCGAGGGTGGAGGAGGAGATTGTGAAGGAGATAAGTGAGAAATCAGAAGCTCCTGTGTATGATGAAGTGAAGGAGATGGTTTACACACACGCGGCGTTGTGTGAGAGCATGAGGCTTTACCCGCCTGTGCCGACGGATAGTAAGGAAGCGATGGACGACGACGTTTTGCCGGATGGGACGAAAGTGAAGAAGGGGATGATGGTGACGTATCACGTGTACGCTATGGGAAGGATGGAGAGTCTTTGGGGTAGTGATTGGGCCGAGTTTAGGCCCGAGAGGTGGTTAGAGAAGGATGAGTCAACTGGCAAGTGGCGGTTTGTGGCGAGGGATTCATACTCGTATCCGGTGTTTCAAGCGGGTCCCAGGATTTGTTTGGGGAAGGAAATGGCCTTTCTGCAGATGAAGAGAGTGGTGGCTGGCATTCTGAGCCACTTCACTGTGGTGCCGTTGCCTCATTTAGTTGAGCATCCAAACTTCATTTCCTTCTTGTCTTCCCAAATGGAGGGTGGTTTCCCAGTTACCATCCACCCACCCCAGGCTTCCTTCTCCTTCACAATAAAAAGAAAATGA 1539 0.4893 MLPYLLLLPLLFILPVLFFFFFFVKPSSSSSNITIPKAYPLIGSYLALKANSKRRIQWLSDIVQISPAATFILNGTMGRKQVITGNPAIVQHILKTRFSNYQKGTTFTGTLSEFLGTGIFNTNGDNWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPILTSASATQDQVLDFQDILQRFAFDNICKIAFGFDPEYLTASVERSKFAQAFEDATEISSKRFREPFPLIWKIKKQLNIGSEKKLRMAVREVREFARKIVREKKQELKENASLDSVDMLSRFLSSGHSDEDFVMDIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVKEISEKSEAPVYDEVKEMVYTHAALCESMRLYPPVPTDSKEAMDDDVLPDGTKVKKGMMVTYHVYAMGRMESLWGSDWAEFRPERWLEKDESTGKWRFVARDSYSYPVFQAGPRICLGKEMAFLQMKRVVAGILSHFTVVPLPHLVEHPNFISFLSSQMEGGFPVTIHPPQASFSFTIKRK. 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04662 512 Gene3D Cytochrome P450 18 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PANTHER CYTOCHROME P450 24 496 - -
Seca1g04662 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 Pfam Cytochrome P450 76 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 SUPERFAMILY Cytochrome P450 36 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04662 512 CDD CYP86A 70 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04662 Seca-Chr1 148727863 148729401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04662 10 498 Cytochrome P450 AT5G63450 46.371 9.00e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04662 K20769 K13407 ag:AAD10204 762.681