LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca1g04660	ATGCTTCCATTTCTATTACCTCTCTTGTTCATCCTTCCCGTGCTCTTCTTCTTCGTGAGACCTTCTCTGAAGAAGAAAGAGATAGCTCAGTCATCTTTAAGTAGTAGCATTACCATCCCAAAAGCATACCCACTGATCGGTTCCTACTTAGCCATCAAAGCCAACGCCAACCGCCGCATCCAATGGCTATCCGATATCGTCCAAATCTCACCGGCAGCCACCTTCACCCTCGTCCGCCCCATGGGTAGAAAACAAGTCATCACCGGCAACCCCGCAACTGTACAACACATTCTCAAGACCCATTTCTCCAATTACCAAAAAGGCACCATCTTCACAGGCTCCCTCTCAGAATTCCTTGGCACAGGAATATTCAACACCAACGGCGACAACTGGAAGTTTCAAAGACAAGTTGCCAGCCACGAATTCAACACAAAGTCTCTCCGTAAATTCGTCGAACACGTGGTGGACGCTGAGCTCTCTGACCGTCTCATCCCCATCCTCACATCCGCCTCTGCAACACAAGACCAAGTCCTCGATTTCCAAGACATCCTCCAACGATTCGCGTTTGATAACATCTGCAAAATCGCGTTTGGGTTCGACCCGGAATATCTAACGCCGTCCATCGAGAGAAGCAAGTTCGCTCAAGCTTTCGAAGAAGCAACAGAGATCAGCAGCAAACGGTTCCGTGGGCTGCTACCCGTATTCTGGAAAATCAAGAGGCAACTTAACATAGGATCGGAAAGGCAACTGCGAATTGCGGTGAAGGAAGTCCGTGAATTTGCGAAGAACATAATCAGAGAAAAAAAGCGAGAACTGAAGGAGAATTCGTCCCTGGAATCTGTGGACATGTTATCGCGGTTTCTGAGTTCGGGGCATTCGGATGAGGATTTTGTGACGGATATAGTGATAAGTTTTATTTTGGCGGGAAAGGATACGACATCGGCGGCGCTGACGTGGTTTTTCTGGTTGTTGTGGAAGAATCCGAGGGTGGAAGAGGAGATTGTGAAGGAGATAAGTGAGAAATCAGAAGCTCCTGTGTATGATGAAGTGAAAGAGATGGTTTACACACACGCGGCGTTGTGTGAGAGCATGAGGCTTTACCCACCAGTGCCGATGGATAGTAAGGAAGCGGTGGACGACGACGTTTTGCCGGATGGGACGGAAGTGAAGAAGGGGATGATGGTGACGTATCACGTGTACGCTATGGGGAGGATGGAGAGCCTTTGGGGTAGTGATTGGGCCGAGTTTAGGCCCGAGAGGTGGTTAGAGAAGGATGAGTCAACCGGCAAGTGGAGGTTTGTGGCGAAGGATTCATTCTCGTATCCGGTGTTTCAAGCGGGACCAAGGATTTGTTTGGGGAAGGAAATGGCATTTTTGCAGATGAAGAGAATGGTGGCTGGCATTCTGAACCACTTCAGGGTGGTGCCGTTGCCTCATTTAGCTGAACATCCAAACTTCATTTCGTTCTTGTCTTCCCAGATGGAAGGTGGTTTCCCAGTCACCATCCAGCCAAGGCTTCTTCCTTCTTCACATTAG	1536	0.4902	MLPFLLPLLFILPVLFFFVRPSLKKKEIAQSSLSSSITIPKAYPLIGSYLAIKANANRRIQWLSDIVQISPAATFTLVRPMGRKQVITGNPATVQHILKTHFSNYQKGTIFTGSLSEFLGTGIFNTNGDNWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPILTSASATQDQVLDFQDILQRFAFDNICKIAFGFDPEYLTPSIERSKFAQAFEEATEISSKRFRGLLPVFWKIKRQLNIGSERQLRIAVKEVREFAKNIIREKKRELKENSSLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVKEISEKSEAPVYDEVKEMVYTHAALCESMRLYPPVPMDSKEAVDDDVLPDGTEVKKGMMVTYHVYAMGRMESLWGSDWAEFRPERWLEKDESTGKWRFVAKDSFSYPVFQAGPRICLGKEMAFLQMKRMVAGILNHFRVVPLPHLAEHPNFISFLSSQMEGGFPVTIQPRLLPSSH.	512

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca1g04660	511	PRINTS	P450 superfamily signature	442	451	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	PRINTS	P450 superfamily signature	358	369	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	PRINTS	P450 superfamily signature	308	325	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	PRINTS	P450 superfamily signature	451	462	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	PANTHER	CYTOCHROME P450	32	500	-	-
	Seca1g04660	511	SUPERFAMILY	Cytochrome P450	40	505	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	Gene3D	Cytochrome P450	25	507	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	Pfam	Cytochrome P450	41	488	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	PRINTS	E-class P450 group I signature	297	314	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04660	511	PRINTS	E-class P450 group I signature	451	474	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca1g04660	Seca-Chr1	148709821	148711356	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca1g04660	8	505	Cytochrome P450	AT5G63450	46.307	2.89e-153	447

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca1g04660	K20769		K13407	gmx:100817669	764.992

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