Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04660 ATGCTTCCATTTCTATTACCTCTCTTGTTCATCCTTCCCGTGCTCTTCTTCTTCGTGAGACCTTCTCTGAAGAAGAAAGAGATAGCTCAGTCATCTTTAAGTAGTAGCATTACCATCCCAAAAGCATACCCACTGATCGGTTCCTACTTAGCCATCAAAGCCAACGCCAACCGCCGCATCCAATGGCTATCCGATATCGTCCAAATCTCACCGGCAGCCACCTTCACCCTCGTCCGCCCCATGGGTAGAAAACAAGTCATCACCGGCAACCCCGCAACTGTACAACACATTCTCAAGACCCATTTCTCCAATTACCAAAAAGGCACCATCTTCACAGGCTCCCTCTCAGAATTCCTTGGCACAGGAATATTCAACACCAACGGCGACAACTGGAAGTTTCAAAGACAAGTTGCCAGCCACGAATTCAACACAAAGTCTCTCCGTAAATTCGTCGAACACGTGGTGGACGCTGAGCTCTCTGACCGTCTCATCCCCATCCTCACATCCGCCTCTGCAACACAAGACCAAGTCCTCGATTTCCAAGACATCCTCCAACGATTCGCGTTTGATAACATCTGCAAAATCGCGTTTGGGTTCGACCCGGAATATCTAACGCCGTCCATCGAGAGAAGCAAGTTCGCTCAAGCTTTCGAAGAAGCAACAGAGATCAGCAGCAAACGGTTCCGTGGGCTGCTACCCGTATTCTGGAAAATCAAGAGGCAACTTAACATAGGATCGGAAAGGCAACTGCGAATTGCGGTGAAGGAAGTCCGTGAATTTGCGAAGAACATAATCAGAGAAAAAAAGCGAGAACTGAAGGAGAATTCGTCCCTGGAATCTGTGGACATGTTATCGCGGTTTCTGAGTTCGGGGCATTCGGATGAGGATTTTGTGACGGATATAGTGATAAGTTTTATTTTGGCGGGAAAGGATACGACATCGGCGGCGCTGACGTGGTTTTTCTGGTTGTTGTGGAAGAATCCGAGGGTGGAAGAGGAGATTGTGAAGGAGATAAGTGAGAAATCAGAAGCTCCTGTGTATGATGAAGTGAAAGAGATGGTTTACACACACGCGGCGTTGTGTGAGAGCATGAGGCTTTACCCACCAGTGCCGATGGATAGTAAGGAAGCGGTGGACGACGACGTTTTGCCGGATGGGACGGAAGTGAAGAAGGGGATGATGGTGACGTATCACGTGTACGCTATGGGGAGGATGGAGAGCCTTTGGGGTAGTGATTGGGCCGAGTTTAGGCCCGAGAGGTGGTTAGAGAAGGATGAGTCAACCGGCAAGTGGAGGTTTGTGGCGAAGGATTCATTCTCGTATCCGGTGTTTCAAGCGGGACCAAGGATTTGTTTGGGGAAGGAAATGGCATTTTTGCAGATGAAGAGAATGGTGGCTGGCATTCTGAACCACTTCAGGGTGGTGCCGTTGCCTCATTTAGCTGAACATCCAAACTTCATTTCGTTCTTGTCTTCCCAGATGGAAGGTGGTTTCCCAGTCACCATCCAGCCAAGGCTTCTTCCTTCTTCACATTAG 1536 0.4902 MLPFLLPLLFILPVLFFFVRPSLKKKEIAQSSLSSSITIPKAYPLIGSYLAIKANANRRIQWLSDIVQISPAATFTLVRPMGRKQVITGNPATVQHILKTHFSNYQKGTIFTGSLSEFLGTGIFNTNGDNWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPILTSASATQDQVLDFQDILQRFAFDNICKIAFGFDPEYLTPSIERSKFAQAFEEATEISSKRFRGLLPVFWKIKRQLNIGSERQLRIAVKEVREFAKNIIREKKRELKENSSLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVKEISEKSEAPVYDEVKEMVYTHAALCESMRLYPPVPMDSKEAVDDDVLPDGTEVKKGMMVTYHVYAMGRMESLWGSDWAEFRPERWLEKDESTGKWRFVAKDSFSYPVFQAGPRICLGKEMAFLQMKRMVAGILNHFRVVPLPHLAEHPNFISFLSSQMEGGFPVTIQPRLLPSSH. 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04660 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PANTHER CYTOCHROME P450 32 500 - -
Seca1g04660 511 SUPERFAMILY Cytochrome P450 40 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 Pfam Cytochrome P450 41 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04660 511 CDD CYP86A 74 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04660 Seca-Chr1 148709821 148711356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04660 8 505 Cytochrome P450 AT5G63450 46.307 2.89e-153 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04660 K20769 K13407 gmx:100817669 764.992