Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04492 ATGGCTGGGAGTAATGAGGTTAACCTTAATGAATCTAGGAGTGCTGTTCCACTCAATACATGGGTGCTTATCTCGAATTTCAAGCTGGCTTACAATCTTCTTAGACGTGCGGATGGAACATTCAACAGAGAGTTAGCAGAGTTTCTTGATCGGAAGGTTCCTGCCAATACAATTCCTGTTGATGGGGTCTTCTCTTTTGATCATGTTGATCGAAACAGTGGCCTCTTTAATAGGGTGTACCTTCCAGCTTCTGAAAATGAGACTCAATGGGGTATCAAAAACCTTGAGAAGCCTTTGAGCACAACAGAGATTGTTCCTGTGATAATATTCTTCCATGGAGGAAGCTTCTCTCATTCCTCTGCAAACAGTGCTATCTATGACACCTTCTGCCGTCGCCTTGTGAGCATTTGTAAGGCTGCTGTGGTGTCTGTGAATTACCGGCGATCACCGGAGCATAGGTACCCTTGTGCTTATGATGATGGTTGGTCTGCACTAAAGTGGGTAAAGTCAAGAACTTGGCTTCAGAGTGGAAAGGAATCTAAGGTTTATGTGTACATGGCTGGGGACAGTTCTGGTGGGAATATTGTTCATCATGTGGCAGTGAGGGCTGCTGAGGAAGAAATTGAGGTGTTAGGGAACATTCTTCTTCATCCTTTGTTTGGTGGGGAGAAGAGAACAGAGTCAGAAATGAGATTGGATGGGAAGTACTTTGTGAGGTTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTACCTGAAGGAGAGGATAGAGACCATCCTGCTTGTAACCCATTTGGACCTAAAGGGAAAAGCCTTGCAGGACTCAAGTTCCCCAAAAGTCTTGTATGTGTAGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGCTTATGTGGAAGGTCTTGAGAAATCTGGCCAACAAGTCAAACTTCTTTACCTTAAGGAGGCCACAATTGGTTTCTACTTCTTGCCAAATAATGATCATTTCTATTGCCTCATGGAGGAGATCAAGAACTTCGTCAATTCTAACTGTTAA 1035 0.4386 MAGSNEVNLNESRSAVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNSGLFNRVYLPASENETQWGIKNLEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAAVVSVNYRRSPEHRYPCAYDDGWSALKWVKSRTWLQSGKESKVYVYMAGDSSGGNIVHHVAVRAAEEEIEVLGNILLHPLFGGEKRTESEMRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGKSLAGLKFPKSLVCVAGLDLLQDWQLAYVEGLEKSGQQVKLLYLKEATIGFYFLPNNDHFYCLMEEIKNFVNSNC. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04492 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Seca1g04492 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Seca1g04492 344 FunFam Gibberellin receptor GID1 1 342 - -
Seca1g04492 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Seca1g04492 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Seca1g04492 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Seca1g04492 344 SUPERFAMILY alpha/beta-Hydrolases 59 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04492 Seca-Chr1 146210081 146212518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04492 1 342 Carbohydrate Esterase AT3G63010 76.968 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04492 K14493 - gmx:100788435 622.468