Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04491 ATGAATGCAATCCATAAGGTTTATAAGATTGCAAAAGCACAAACACTTATAGCATTATTGAGTATTGTGCCAGGTTACCAGTTCACAGTAGCATTCATTGATTACATGGGTCGTTTTGCCATCCAATTTATGACTGTCTTCATGTTTGCAATAGCCATACCATATGATTATTGGACCAAGAAAGAAAACAGAATTGGGTTTGTGGCGATGTACTCACTCACCTTCCTTCTTCACACATTTGCTGTGCCAGCAGAGATACTCCCAGCAAGGCTAAGGTATACTTGTCATGGAATCTCAGCTGTTGCAGGAAAGGCAGGAGCAATTGTAGGTGCACTTGGTTTCTTATATGCTGCACAAAGTAAGGACCCCACCAAGACTAATAAAGGGTATCCAACTGGTATTGGGATTAAGCTAGAACTCCCTTATTATGCTTGGTGTGATCAACTTCGCTGGGATCTTATTCACCTTACTGGTTCCAAAATATGGCCATCTACCAAGCAACAAATTACTACAGGAACAGGAAAAAAGTATACTGGTATAAGGAGAAAATAA 552 0.4004 MNAIHKVYKIAKAQTLIALLSIVPGYQFTVAFIDYMGRFAIQFMTVFMFAIAIPYDYWTKKENRIGFVAMYSLTFLLHTFAVPAEILPARLRYTCHGISAVAGKAGAIVGALGFLYAAQSKDPTKTNKGYPTGIGIKLELPYYAWCDQLRWDLIHLTGSKIWPSTKQQITTGTGKKYTGIRRK. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04491 183 SUPERFAMILY MFS general substrate transporter 16 120 IPR036259 -
Seca1g04491 183 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 15 130 - -
Seca1g04491 183 Gene3D MFS general substrate transporter like domains 1 136 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04491 Seca-Chr1 146187315 146187866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04491 1 140 Inorganic Solute Cotransporters AT3G54700 70.395 2.63e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04491 K08176 - gmx:100780201 218.009